Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.nonSL2-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,553]

Sequences

Amino acid sequence

Length: 336

>KH.L9.10.v1.A.nonSL2-1
KVGTLDALIGLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMHRFQ
WNLAKYPVKLPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLLRNL
REIVKKEDFIHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYGLYG
VTIFKKVYEEFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWLKVN
FSEVFTAWMHVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLDSTG
LAAVNEDDFLPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,280

>KH2012:KH.L9.10.v1.A.nonSL2-1
AAAGTTGGGACGTTGGACGCCTTAATCGGTTTGTCGGACGATCTGGGGAAATTAGATATT
TTTGCTGAAGGGTTGTTAAATACCTATAGTAACAAATGGTTAAAGACAAAACTTAACCCC
AACATTAACAACGATAAACATTTCAGNGCCACCCTTGAAACCTTCATGCATCGCTTTCAA
TGGAACTTGGCAAAATACCCCGTCAAGTTACCTCTCAAAAGTTTGGCCGAAATTAGTTCA
AAAGTTGTCACGCAAGTCGACACAGATCTTCGCACAAAGTCGCAAGCTTACAATAATCTA
AAATCAAATCTACAAAACATGGAGCGGAAAGCAACTGGGAGTTTGCTGCTTCGGAACTTG
AGGGAAATCGTAAAAAAAGAAGATTTCATTCACGATTCGGAGTATTTGCAAACATTGCTT
GTTGCTGTGCCGGTACAAACAACCGAAGAATGGGAAAAGAATTACGAAACTTTAACAGAT
TACGTCGCACCTCGTTCGTCAAGGTTACTTTATCGGGACGAGGAGTATGGACTTTATGGC
GTCACAATATTCAAGAAAGTTTATGAAGAATTCAAAACTAAATGCGGACGGCACAAATTT
TTCCTCCGTGACTTTCAATACAACGAGCGCGACATGGCGTCTGATAAAGATCAACTCACT
AAATTGACTTCGGATAAAAAGAAGATGTTGGGCCCCCTACTACGATGGTTGAAAGTCAAC
TTCAGCGAAGTATTCACCGCATGGATGCACGTGAAGGCACTCCGAGTGTTCGTGGAATCT
GTGTTAAGGTACGGACTTCCTGTCAACTTCCAAGCAACTGTTGTCCAACCGCAGAAGAAA
CAATCCAAAAGATTGCAAGAAACATTGAATAAGTTGTATGTTGGCCTGGATAGCACGGGA
CTCGCTGCTGTTAATGAGGACGATTTTCTTCCCGGTTTAACCCTCGGCACCCAGGAATAT
CATCCCTACGTGTTTTACAAGGTCGTCCTCGACTTTGAATCGCAACATTAATATGATTTC
TATGTAAATTGTTGTGCAATACCAATGTATCGGAATAAATCGTGTATTTTGTCTTTGAAA
CATAAACTTGAACTTTTGACCTCCGAGCCTATTATGACATCACATATCCATCGGTTGTTC
TTCGTCTTCGCGTGGTTGACCGCTCACAGGGGGGACCAATCCCGGGAGTTCCCCCTGGAA
AATGTTATTGATTTATTTGTTGAATTGTTAAAGAAATGTAAATGGCACAAAGTTACATCT
GTGGTATAAAGGTGCCATTG

InterProScan

CDD	ATPase_V1-cplx_csu (IPR004907) - T[1-328] 1.05433E-145
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[1-332] 3.4E-133
SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[1-328] 9.02E-114
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[1-324] 7.3E-124

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	54.192 %	366	3.09E-126
VATC2_HUMAN	44.094 %	312	2.03E-104