Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.nonSL7-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,707]

Sequences

Amino acid sequence

Length: 387

>KH.L9.10.v1.A.nonSL7-1
ELFCRLLFEVEMSEYWLISAPGDKTPQQTWEKLNRATQQMSNNHKFHIPDLKVGTLDALI
GLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMHRFQWNLAKYPVK
LPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLLRNLREIVKKEDF
IHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYGLYGVTIFKKVYE
EFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWLKVNFSEVFTAWM
HVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLDSTGLAAVNEDDF
LPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,434

>KH2012:KH.L9.10.v1.A.nonSL7-1
AGAATTATTTTGTCGTCTGTTATTTGAGGTTGAGATGTCAGAATATTGGTTGATAAGCGC
GCCAGGGGATAAAACACCCCAGCAAACATGGGAGAAATTAAACAGGGCGACGCAACAAAT
GTCGAATAATCATAAATTTCACATCCCAGACCTCAAAGTTGGGACGTTGGACGCCTTAAT
CGGTTTGTCGGACGATCTGGGGAAATTAGATATTTTTGCTGAAGGGTTGTTAAATACCTA
TAGTAACAAATGGTTAAAGACAAAACTTAACCCCAACATTAACAACGATAAACATTTCAG
NGCCACCCTTGAAACCTTCATGCATCGCTTTCAATGGAACTTGGCAAAATACCCCGTCAA
GTTACCTCTCAAAAGTTTGGCCGAAATTAGTTCAAAAGTTGTCACGCAAGTCGACACAGA
TCTTCGCACAAAGTCGCAAGCTTACAATAATCTAAAATCAAATCTACAAAACATGGAGCG
GAAAGCAACTGGGAGTTTGCTGCTTCGGAACTTGAGGGAAATCGTAAAAAAAGAAGATTT
CATTCACGATTCGGAGTATTTGCAAACATTGCTTGTTGCTGTGCCGGTACAAACAACCGA
AGAATGGGAAAAGAATTACGAAACTTTAACAGATTACGTCGCACCTCGTTCGTCAAGGTT
ACTTTATCGGGACGAGGAGTATGGACTTTATGGCGTCACAATATTCAAGAAAGTTTATGA
AGAATTCAAAACTAAATGCGGACGGCACAAATTTTTCCTCCGTGACTTTCAATACAACGA
GCGCGACATGGCGTCTGATAAAGATCAACTCACTAAATTGACTTCGGATAAAAAGAAGAT
GTTGGGCCCCCTACTACGATGGTTGAAAGTCAACTTCAGCGAAGTATTCACCGCATGGAT
GCACGTGAAGGCACTCCGAGTGTTCGTGGAATCTGTGTTAAGGTACGGACTTCCTGTCAA
CTTCCAAGCAACTGTTGTCCAACCGCAGAAGAAACAATCCAAAAGATTGCAAGAAACATT
GAATAAGTTGTATGTTGGCCTGGATAGCACGGGACTCGCTGCTGTTAATGAGGACGATTT
TCTTCCCGGTTTAACCCTCGGCACCCAGGAATATCATCCCTACGTGTTTTACAAGGTCGT
CCTCGACTTTGAATCGCAACATTAATATGATTTCTATGTAAATTGTTGTGCAATACCAAT
GTATCGGAATAAATCGTGTATTTTGTCTTTGAAACATAAACTTGAACTTTTGACCTCCGA
GCCTATTATGACATCACATATCCATCGGTTGTTCTTCGTCTTCGCGTGGTTGACCGCTCA
CAGGGGGGACCAATCCCGGGAGTTCCCCCTGGAAAATGTTATTGATTTATTTGTTGAATT
GTTAAAGAAATGTAAATGGCACAAAGTTACATCTGTGGTATAAAGGTGCCATTG

InterProScan

SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[12-379] 2.48E-126
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[12-383] 1.8E-151
CDD	ATPase_V1-cplx_csu (IPR004907) - T[15-379] 1.29554E-163
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[15-375] 2.6E-139

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	55.172 %	420	1.4E-146
VATC2_HUMAN	45.154 %	355	1.1E-120