Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.nonSL9-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,715]

Sequences

Amino acid sequence

Length: 390

>KH.L9.10.v1.A.nonSL9-1
VVKELFCRLLFEVEMSEYWLISAPGDKTPQQTWEKLNRATQQMSNNHKFHIPDLKVGTLD
ALIGLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMHRFQWNLAKY
PVKLPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLLRNLREIVKK
EDFIHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYGLYGVTIFKK
VYEEFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWLKVNFSEVFT
AWMHVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLDSTGLAAVNE
DDFLPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,442

>KH2012:KH.L9.10.v1.A.nonSL9-1
GTTGTTAAAGAATTATTTTGTCGTCTGTTATTTGAGGTTGAGATGTCAGAATATTGGTTG
ATAAGCGCGCCAGGGGATAAAACACCCCAGCAAACATGGGAGAAATTAAACAGGGCGACG
CAACAAATGTCGAATAATCATAAATTTCACATCCCAGACCTCAAAGTTGGGACGTTGGAC
GCCTTAATCGGTTTGTCGGACGATCTGGGGAAATTAGATATTTTTGCTGAAGGGTTGTTA
AATACCTATAGTAACAAATGGTTAAAGACAAAACTTAACCCCAACATTAACAACGATAAA
CATTTCAGNGCCACCCTTGAAACCTTCATGCATCGCTTTCAATGGAACTTGGCAAAATAC
CCCGTCAAGTTACCTCTCAAAAGTTTGGCCGAAATTAGTTCAAAAGTTGTCACGCAAGTC
GACACAGATCTTCGCACAAAGTCGCAAGCTTACAATAATCTAAAATCAAATCTACAAAAC
ATGGAGCGGAAAGCAACTGGGAGTTTGCTGCTTCGGAACTTGAGGGAAATCGTAAAAAAA
GAAGATTTCATTCACGATTCGGAGTATTTGCAAACATTGCTTGTTGCTGTGCCGGTACAA
ACAACCGAAGAATGGGAAAAGAATTACGAAACTTTAACAGATTACGTCGCACCTCGTTCG
TCAAGGTTACTTTATCGGGACGAGGAGTATGGACTTTATGGCGTCACAATATTCAAGAAA
GTTTATGAAGAATTCAAAACTAAATGCGGACGGCACAAATTTTTCCTCCGTGACTTTCAA
TACAACGAGCGCGACATGGCGTCTGATAAAGATCAACTCACTAAATTGACTTCGGATAAA
AAGAAGATGTTGGGCCCCCTACTACGATGGTTGAAAGTCAACTTCAGCGAAGTATTCACC
GCATGGATGCACGTGAAGGCACTCCGAGTGTTCGTGGAATCTGTGTTAAGGTACGGACTT
CCTGTCAACTTCCAAGCAACTGTTGTCCAACCGCAGAAGAAACAATCCAAAAGATTGCAA
GAAACATTGAATAAGTTGTATGTTGGCCTGGATAGCACGGGACTCGCTGCTGTTAATGAG
GACGATTTTCTTCCCGGTTTAACCCTCGGCACCCAGGAATATCATCCCTACGTGTTTTAC
AAGGTCGTCCTCGACTTTGAATCGCAACATTAATATGATTTCTATGTAAATTGTTGTGCA
ATACCAATGTATCGGAATAAATCGTGTATTTTGTCTTTGAAACATAAACTTGAACTTTTG
ACCTCCGAGCCTATTATGACATCACATATCCATCGGTTGTTCTTCGTCTTCGCGTGGTTG
ACCGCTCACAGGGGGGACCAATCCCGGGAGTTCCCCCTGGAAAATGTTATTGATTTATTT
GTTGAATTGTTAAAGAAATGTAAATGGCACAAAGTTACATCTGTGGTATAAAGGTGCCAT
TG

InterProScan

SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[15-382] 2.48E-126
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[15-386] 1.9E-151
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[18-378] 2.7E-139
CDD	ATPase_V1-cplx_csu (IPR004907) - T[18-382] 3.08281E-163

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	55.172 %	420	1.28E-146
VATC2_HUMAN	45.154 %	355	1.63E-120