Aniseed - Transcript Card

Transcript 'KH2012:KH.L9.10.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L9.10.v1.A.SL11-1

Possible name(s)

ATP6V1C1; ATP6V1C2

Gene model

KH2012:KH.L9.10

Location

KhL9 [168,802 / 171,558]

Sequences

Amino acid sequence

Length: 337

>KH.L9.10.v1.A.SL11-1
LKVGTLDALIGLSDDLGKLDIFAEGLLNTYSNKWLKTKLNPNINNDKHFXATLETFMHRF
QWNLAKYPVKLPLKSLAEISSKVVTQVDTDLRTKSQAYNNLKSNLQNMERKATGSLLLRN
LREIVKKEDFIHDSEYLQTLLVAVPVQTTEEWEKNYETLTDYVAPRSSRLLYRDEEYGLY
GVTIFKKVYEEFKTKCGRHKFFLRDFQYNERDMASDKDQLTKLTSDKKKMLGPLLRWLKV
NFSEVFTAWMHVKALRVFVESVLRYGLPVNFQATVVQPQKKQSKRLQETLNKLYVGLDST
GLAAVNEDDFLPGLTLGTQEYHPYVFYKVVLDFESQH

Nucleotide sequence

Length: 1,285

>KH2012:KH.L9.10.v1.A.SL11-1
ACCTCAAAGTTGGGACGTTGGACGCCTTAATCGGTTTGTCGGACGATCTGGGGAAATTAG
ATATTTTTGCTGAAGGGTTGTTAAATACCTATAGTAACAAATGGTTAAAGACAAAACTTA
ACCCCAACATTAACAACGATAAACATTTCAGNGCCACCCTTGAAACCTTCATGCATCGCT
TTCAATGGAACTTGGCAAAATACCCCGTCAAGTTACCTCTCAAAAGTTTGGCCGAAATTA
GTTCAAAAGTTGTCACGCAAGTCGACACAGATCTTCGCACAAAGTCGCAAGCTTACAATA
ATCTAAAATCAAATCTACAAAACATGGAGCGGAAAGCAACTGGGAGTTTGCTGCTTCGGA
ACTTGAGGGAAATCGTAAAAAAAGAAGATTTCATTCACGATTCGGAGTATTTGCAAACAT
TGCTTGTTGCTGTGCCGGTACAAACAACCGAAGAATGGGAAAAGAATTACGAAACTTTAA
CAGATTACGTCGCACCTCGTTCGTCAAGGTTACTTTATCGGGACGAGGAGTATGGACTTT
ATGGCGTCACAATATTCAAGAAAGTTTATGAAGAATTCAAAACTAAATGCGGACGGCACA
AATTTTTCCTCCGTGACTTTCAATACAACGAGCGCGACATGGCGTCTGATAAAGATCAAC
TCACTAAATTGACTTCGGATAAAAAGAAGATGTTGGGCCCCCTACTACGATGGTTGAAAG
TCAACTTCAGCGAAGTATTCACCGCATGGATGCACGTGAAGGCACTCCGAGTGTTCGTGG
AATCTGTGTTAAGGTACGGACTTCCTGTCAACTTCCAAGCAACTGTTGTCCAACCGCAGA
AGAAACAATCCAAAAGATTGCAAGAAACATTGAATAAGTTGTATGTTGGCCTGGATAGCA
CGGGACTCGCTGCTGTTAATGAGGACGATTTTCTTCCCGGTTTAACCCTCGGCACCCAGG
AATATCATCCCTACGTGTTTTACAAGGTCGTCCTCGACTTTGAATCGCAACATTAATATG
ATTTCTATGTAAATTGTTGTGCAATACCAATGTATCGGAATAAATCGTGTATTTTGTCTT
TGAAACATAAACTTGAACTTTTGACCTCCGAGCCTATTATGACATCACATATCCATCGGT
TGTTCTTCGTCTTCGCGTGGTTGACCGCTCACAGGGGGGACCAATCCCGGGAGTTCCCCC
TGGAAAATGTTATTGATTTATTTGTTGAATTGTTAAAGAAATGTAAATGGCACAAAGTTA
CATCTGTGGTATAAAGGTGCCATTG

InterProScan

CDD	ATPase_V1-cplx_csu (IPR004907) - T[1-329] 3.96416E-146
Pfam	ATPase_V1-cplx_csu (IPR004907) - T[1-325] 1.6E-124
PANTHER	ATPase_V1-cplx_csu (IPR004907) - T[1-333] 1.0E-133
SUPERFAMILY	Vac_ATP_synth_c_sf (IPR036132) - T[1-329] 2.62E-114

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
VATC1_HUMAN	54.328 %	368	6.82E-127
VATC2_HUMAN	43.979 %	312	2.59E-104