- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L9.2.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L9.2.v1.A.nonSL2-1
Possible name(s)
AC018523.2; PSMA1; PSMA5
Gene model
Location
KhL9 [166,474 / 169,229]
Amino acid sequence
Length: 291
>KH.L9.2.v1.A.nonSL2-1
LHKTFDNRSNKMFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATIGLKSKTHAVLVAL
KRAQSDLIAHQKKIEKISPHIGISISGLTSDARSLGNYMRSECMHHEFLFNTRLPVSRLV
AAVGDKTQTPTQRYGRRPFGVGILVAGFDEKGPHIYQTCPSANYYNCKAMAIGSRSQSAR
TYLERHLNEFADCTPEELVRHGLTALRETLPSEQELSVKNCSVAVVGEGQDLVVYEDDQV
SIFLDLLEEKRSSRNEPAPQQQEVGQVGELPGLVPPVSGQPREDEEQPMDM
Nucleotide sequence
Length: 1,142
>KH2012:KH.L9.2.v1.A.nonSL2-1
CTACACAAAACTTTCGACAATCGTTCAAACAAGATGTTTCGCAACCAATACGACAACGAT
GTGACCGTGTGGAGCCCCCAAGGTCGGATCCACCAGATCGAGTACGCCATGGAAGCTGTT
AAGCAGGGGTCAGCCACCATCGGGTTAAAATCGAAAACCCACGCCGTGCTTGTCGCACTC
AAACGCGCCCAATCAGACCTGATAGCTCACCAGAAGAAGATCGAGAAAATTTCGCCCCAC
ATCGGGATCTCAATATCGGGGTTAACGTCCGATGCGAGGTCGTTGGGGAACTACATGCGC
AGCGAGTGCATGCACCATGAGTTTCTATTCAACACGAGGTTACCCGTGTCAAGACTCGTG
GCTGCAGTTGGGGACAAAACCCAAACACCCACGCAACGATACGGACGTCGACCGTTCGGG
GTCGGAATCCTTGTGGCTGGGTTTGATGAGAAAGGTCCCCACATCTACCAGACTTGCCCA
TCAGCTAATTATTACAACTGCAAAGCTATGGCTATTGGTTCACGATCACAAAGTGCTAGA
ACTTATTTAGAAAGACATCTCAATGAATTTGCTGATTGCACCCCTGAGGAGTTGGTGCGA
CACGGGTTAACAGCGTTACGGGAAACCCTCCCGTCCGAACAAGAACTTTCGGTGAAGAAT
TGTTCGGTGGCCGTGGTTGGGGAGGGACAGGACCTCGTGGTGTACGAGGACGATCAAGTG
TCGATATTCCTTGATTTATTGGAGGAGAAACGATCGTCGAGGAACGAACCGGCTCCCCAA
CAACAAGAGGTTGGGCAAGTGGGGGAACTCCCGGGATTGGTCCCCCCTGTGAGCGGTCAA
CCACGCGAAGACGAAGAACAACCGATGGATATGTGATGTCATAATAGGCTCGGAGGTCAA
AAGTTCAAGTTTATGTTTCAAAGACAAAATACACGATTTATTCCGATACATTGGTATTGC
ACAACAATTTACATAGAAATCATATTAATGTTGCGATTCAAAGTCGAGGACGACCTTGTA
AAACACGTAGGGATGATATTCCTGGGTGCCGAGGGTTAAACCGGGAAGAAAATCGTCCTG
CGAGGAAATTGAAGATTAATATTTATAAGTTGTGATGTTGAATAAAGCTAAATGTAAACG
GA
| PANTHER |
Proteasome_alpha1 (IPR035144) - T[12-262] 3.0E-115 |
| Gene3D |
Ntn_hydrolases_N (IPR029055) - T[12-247] 5.8E-84 |
| SUPERFAMILY |
Ntn_hydrolases_N (IPR029055) - T[15-249] 4.07E-73 |
| ProSitePatterns |
Proteasome_asu_N (IPR000426) - T[17-39] . |
| SMART |
Proteasome_asu_N (IPR000426) - T[17-39] 1.3E-9 |
| CDD |
Proteasome_alpha1 (IPR035144) - T[17-227] 1.83837E-142 |
| Pfam |
Proteasome_asu_N (IPR000426) - T[17-39] 5.7E-13 |
| ProSiteProfiles |
Proteasome_alpha-type (IPR023332) - T[32-244] 70.558 |
| Pfam |
Proteasome_sua/b (IPR001353) - T[40-226] 3.1E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMA8_HUMAN | 32.636 % | 133 | 1.29E-37 |
| PSA5_HUMAN | 34.167 % | 140 | 1.71E-40 |
| PSA1_HUMAN | 66.923 % | 379 | 6.95E-134 |