- Transcript 'KH2012:KH.C3.199.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S4...' >
- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L9.2.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L9.2.v1.A.nonSL3-1
Possible name(s)
AC018523.2; PSMA1; PSMA5
Gene model
Location
KhL9 [166,480 / 169,229]
Amino acid sequence
Length: 289
>KH.L9.2.v1.A.nonSL3-1
KTFDNRSNKMFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATIGLKSKTHAVLVALKR
AQSDLIAHQKKIEKISPHIGISISGLTSDARSLGNYMRSECMHHEFLFNTRLPVSRLVAA
VGDKTQTPTQRYGRRPFGVGILVAGFDEKGPHIYQTCPSANYYNCKAMAIGSRSQSARTY
LERHLNEFADCTPEELVRHGLTALRETLPSEQELSVKNCSVAVVGEGQDLVVYEDDQVSI
FLDLLEEKRSSRNEPAPQQQEVGQVGELPGLVPPVSGQPREDEEQPMDM
Nucleotide sequence
Length: 1,136
>KH2012:KH.L9.2.v1.A.nonSL3-1
AAAACTTTCGACAATCGTTCAAACAAGATGTTTCGCAACCAATACGACAACGATGTGACC
GTGTGGAGCCCCCAAGGTCGGATCCACCAGATCGAGTACGCCATGGAAGCTGTTAAGCAG
GGGTCAGCCACCATCGGGTTAAAATCGAAAACCCACGCCGTGCTTGTCGCACTCAAACGC
GCCCAATCAGACCTGATAGCTCACCAGAAGAAGATCGAGAAAATTTCGCCCCACATCGGG
ATCTCAATATCGGGGTTAACGTCCGATGCGAGGTCGTTGGGGAACTACATGCGCAGCGAG
TGCATGCACCATGAGTTTCTATTCAACACGAGGTTACCCGTGTCAAGACTCGTGGCTGCA
GTTGGGGACAAAACCCAAACACCCACGCAACGATACGGACGTCGACCGTTCGGGGTCGGA
ATCCTTGTGGCTGGGTTTGATGAGAAAGGTCCCCACATCTACCAGACTTGCCCATCAGCT
AATTATTACAACTGCAAAGCTATGGCTATTGGTTCACGATCACAAAGTGCTAGAACTTAT
TTAGAAAGACATCTCAATGAATTTGCTGATTGCACCCCTGAGGAGTTGGTGCGACACGGG
TTAACAGCGTTACGGGAAACCCTCCCGTCCGAACAAGAACTTTCGGTGAAGAATTGTTCG
GTGGCCGTGGTTGGGGAGGGACAGGACCTCGTGGTGTACGAGGACGATCAAGTGTCGATA
TTCCTTGATTTATTGGAGGAGAAACGATCGTCGAGGAACGAACCGGCTCCCCAACAACAA
GAGGTTGGGCAAGTGGGGGAACTCCCGGGATTGGTCCCCCCTGTGAGCGGTCAACCACGC
GAAGACGAAGAACAACCGATGGATATGTGATGTCATAATAGGCTCGGAGGTCAAAAGTTC
AAGTTTATGTTTCAAAGACAAAATACACGATTTATTCCGATACATTGGTATTGCACAACA
ATTTACATAGAAATCATATTAATGTTGCGATTCAAAGTCGAGGACGACCTTGTAAAACAC
GTAGGGATGATATTCCTGGGTGCCGAGGGTTAAACCGGGAAGAAAATCGTCCTGCGAGGA
AATTGAAGATTAATATTTATAAGTTGTGATGTTGAATAAAGCTAAATGTAAACGGA
| PANTHER |
Proteasome_alpha1 (IPR035144) - T[10-260] 2.9E-115 |
| Gene3D |
Ntn_hydrolases_N (IPR029055) - T[10-245] 5.7E-84 |
| SUPERFAMILY |
Ntn_hydrolases_N (IPR029055) - T[13-247] 3.87E-73 |
| ProSitePatterns |
Proteasome_asu_N (IPR000426) - T[15-37] . |
| Pfam |
Proteasome_asu_N (IPR000426) - T[15-37] 5.6E-13 |
| CDD |
Proteasome_alpha1 (IPR035144) - T[15-225] 1.6645E-142 |
| SMART |
Proteasome_asu_N (IPR000426) - T[15-37] 1.3E-9 |
| ProSiteProfiles |
Proteasome_alpha-type (IPR023332) - T[30-242] 70.558 |
| Pfam |
Proteasome_sua/b (IPR001353) - T[38-224] 3.0E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMA8_HUMAN | 32.636 % | 133 | 1.66E-37 |
| PSA5_HUMAN | 34.167 % | 140 | 1.57E-40 |
| PSA1_HUMAN | 66.923 % | 380 | 4.29E-134 |