- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.L9.2.v1.A....'
Transcript Model
Transcript Id
KH2012:KH.L9.2.v1.A.nonSL4-1
Possible name(s)
AC018523.2; PSMA1; PSMA5
Gene model
Location
KhL9 [166,476 / 169,229]
Amino acid sequence
Length: 290
>KH.L9.2.v1.A.nonSL4-1
HKTFDNRSNKMFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATIGLKSKTHAVLVALK
RAQSDLIAHQKKIEKISPHIGISISGLTSDARSLGNYMRSECMHHEFLFNTRLPVSRLVA
AVGDKTQTPTQRYGRRPFGVGILVAGFDEKGPHIYQTCPSANYYNCKAMAIGSRSQSART
YLERHLNEFADCTPEELVRHGLTALRETLPSEQELSVKNCSVAVVGEGQDLVVYEDDQVS
IFLDLLEEKRSSRNEPAPQQQEVGQVGELPGLVPPVSGQPREDEEQPMDM
Nucleotide sequence
Length: 1,140
>KH2012:KH.L9.2.v1.A.nonSL4-1
ACACAAAACTTTCGACAATCGTTCAAACAAGATGTTTCGCAACCAATACGACAACGATGT
GACCGTGTGGAGCCCCCAAGGTCGGATCCACCAGATCGAGTACGCCATGGAAGCTGTTAA
GCAGGGGTCAGCCACCATCGGGTTAAAATCGAAAACCCACGCCGTGCTTGTCGCACTCAA
ACGCGCCCAATCAGACCTGATAGCTCACCAGAAGAAGATCGAGAAAATTTCGCCCCACAT
CGGGATCTCAATATCGGGGTTAACGTCCGATGCGAGGTCGTTGGGGAACTACATGCGCAG
CGAGTGCATGCACCATGAGTTTCTATTCAACACGAGGTTACCCGTGTCAAGACTCGTGGC
TGCAGTTGGGGACAAAACCCAAACACCCACGCAACGATACGGACGTCGACCGTTCGGGGT
CGGAATCCTTGTGGCTGGGTTTGATGAGAAAGGTCCCCACATCTACCAGACTTGCCCATC
AGCTAATTATTACAACTGCAAAGCTATGGCTATTGGTTCACGATCACAAAGTGCTAGAAC
TTATTTAGAAAGACATCTCAATGAATTTGCTGATTGCACCCCTGAGGAGTTGGTGCGACA
CGGGTTAACAGCGTTACGGGAAACCCTCCCGTCCGAACAAGAACTTTCGGTGAAGAATTG
TTCGGTGGCCGTGGTTGGGGAGGGACAGGACCTCGTGGTGTACGAGGACGATCAAGTGTC
GATATTCCTTGATTTATTGGAGGAGAAACGATCGTCGAGGAACGAACCGGCTCCCCAACA
ACAAGAGGTTGGGCAAGTGGGGGAACTCCCGGGATTGGTCCCCCCTGTGAGCGGTCAACC
ACGCGAAGACGAAGAACAACCGATGGATATGTGATGTCATAATAGGCTCGGAGGTCAAAA
GTTCAAGTTTATGTTTCAAAGACAAAATACACGATTTATTCCGATACATTGGTATTGCAC
AACAATTTACATAGAAATCATATTAATGTTGCGATTCAAAGTCGAGGACGACCTTGTAAA
ACACGTAGGGATGATATTCCTGGGTGCCGAGGGTTAAACCGGGAAGAAAATCGTCCTGCG
AGGAAATTGAAGATTAATATTTATAAGTTGTGATGTTGAATAAAGCTAAATGTAAACGGA
| PANTHER |
Proteasome_alpha1 (IPR035144) - T[11-261] 3.0E-115 |
| Gene3D |
Ntn_hydrolases_N (IPR029055) - T[11-246] 5.7E-84 |
| SUPERFAMILY |
Ntn_hydrolases_N (IPR029055) - T[14-248] 4.07E-73 |
| ProSitePatterns |
Proteasome_asu_N (IPR000426) - T[16-38] . |
| CDD |
Proteasome_alpha1 (IPR035144) - T[16-226] 1.84781E-142 |
| SMART |
Proteasome_asu_N (IPR000426) - T[16-38] 1.3E-9 |
| Pfam |
Proteasome_asu_N (IPR000426) - T[16-38] 5.7E-13 |
| ProSiteProfiles |
Proteasome_alpha-type (IPR023332) - T[31-243] 70.558 |
| Pfam |
Proteasome_sua/b (IPR001353) - T[39-225] 3.0E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMA8_HUMAN | 32.636 % | 133 | 1.78E-37 |
| PSA5_HUMAN | 34.167 % | 140 | 1.59E-40 |
| PSA1_HUMAN | 66.923 % | 379 | 4.87E-134 |