- Transcript 'KH2012:KH.L137.2.v2....' >
- Transcript 'KH2012:KH.L24.2.v1.B...' >
- Transcript 'Boleac.CG.SB_v3.S80....' >
- Transcript 'KH2012:KH.C4.584.v1....' >
- Transcript 'KH2012:KH.L9.2.v1.R....'
Transcript Model
Transcript Id
KH2012:KH.L9.2.v1.R.ND1-1
Possible name(s)
AC018523.2; PSMA1; PSMA5
Gene model
Location
KhL9 [166,491 / 169,229]
Amino acid sequence
Length: 285
>KH.L9.2.v1.R.ND1-1
NRSNKMFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATIGLKSKTHAVLVALKRAQSD
LIAHQKKIEKISPHIGISISGLTSDARSLGNYMRSECMHHEFLFNTRLPVSRLVAAVGDK
TQTPTQRYGRRPFGVGILVAGFDEKGPHIYQTCPSANYYNCKAMAIGSRSQSARTYLERH
LNEFADCTPEELVRHGLTALRETLPSEQELSVKNCSVAVVGEGQDLVVYEDDQVSIFLDL
LEEKRSSRNEPAPQQQEVGQVGELPGLVPPVSGQPREDEEQPMDM
Nucleotide sequence
Length: 1,125
>KH2012:KH.L9.2.v1.R.ND1-1
CAATCGTTCAAACAAGATGTTTCGCAACCAATACGACAACGATGTGACCGTGTGGAGCCC
CCAAGGTCGGATCCACCAGATCGAGTACGCCATGGAAGCTGTTAAGCAGGGGTCAGCCAC
CATCGGGTTAAAATCGAAAACCCACGCCGTGCTTGTCGCACTCAAACGCGCCCAATCAGA
CCTGATAGCTCACCAGAAGAAGATCGAGAAAATTTCGCCCCACATCGGGATCTCAATATC
GGGGTTAACGTCCGATGCGAGGTCGTTGGGGAACTACATGCGCAGCGAGTGCATGCACCA
TGAGTTTCTATTCAACACGAGGTTACCCGTGTCAAGACTCGTGGCTGCAGTTGGGGACAA
AACCCAAACACCCACGCAACGATACGGACGTCGACCGTTCGGGGTCGGAATCCTTGTGGC
TGGGTTTGATGAGAAAGGTCCCCACATCTACCAGACTTGCCCATCAGCTAATTATTACAA
CTGCAAAGCTATGGCTATTGGTTCACGATCACAAAGTGCTAGAACTTATTTAGAAAGACA
TCTCAATGAATTTGCTGATTGCACCCCTGAGGAGTTGGTGCGACACGGGTTAACAGCGTT
ACGGGAAACCCTCCCGTCCGAACAAGAACTTTCGGTGAAGAATTGTTCGGTGGCCGTGGT
TGGGGAGGGACAGGACCTCGTGGTGTACGAGGACGATCAAGTGTCGATATTCCTTGATTT
ATTGGAGGAGAAACGATCGTCGAGGAACGAACCGGCTCCCCAACAACAAGAGGTTGGGCA
AGTGGGGGAACTCCCGGGATTGGTCCCCCCTGTGAGCGGTCAACCACGCGAAGACGAAGA
ACAACCGATGGATATGTGATGTCATAATAGGCTCGGAGGTCAAAAGTTCAAGTTTATGTT
TCAAAGACAAAATACACGATTTATTCCGATACATTGGTATTGCACAACAATTTACATAGA
AATCATATTAATGTTGCGATTCAAAGTCGAGGACGACCTTGTAAAACACGTAGGGATGAT
ATTCCTGGGTGCCGAGGGTTAAACCGGGAAGAAAATCGTCCTGCGAGGAAATTGAAGATT
AATATTTATAAGTTGTGATGTTGAATAAAGCTAAATGTAAACGGA
| PANTHER |
Proteasome_alpha1 (IPR035144) - T[6-256] 2.8E-115 |
| Gene3D |
Ntn_hydrolases_N (IPR029055) - T[6-241] 5.4E-84 |
| SUPERFAMILY |
Ntn_hydrolases_N (IPR029055) - T[9-243] 3.87E-73 |
| ProSitePatterns |
Proteasome_asu_N (IPR000426) - T[11-33] . |
| SMART |
Proteasome_asu_N (IPR000426) - T[11-33] 1.3E-9 |
| CDD |
Proteasome_alpha1 (IPR035144) - T[11-221] 1.60786E-142 |
| Pfam |
Proteasome_asu_N (IPR000426) - T[11-33] 5.5E-13 |
| ProSiteProfiles |
Proteasome_alpha-type (IPR023332) - T[26-238] 70.558 |
| Pfam |
Proteasome_sua/b (IPR001353) - T[34-220] 2.9E-54 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PSMA8_HUMAN | 32.636 % | 133 | 1.19E-37 |
| PSA5_HUMAN | 34.167 % | 140 | 1.27E-40 |
| PSA1_HUMAN | 66.923 % | 379 | 5.06E-134 |