- Transcript 'KH2012:KH.L55.3.v1.A...' >
- Transcript 'KH2012:KH.L96.101.v1...'
Transcript Model
Transcript Id
KH2012:KH.L96.101.v1.A.SL1-1
Possible name(s)
CLIP1; CLIP2; CLIP3
Gene model
Location
KhL96 [544,068 / 564,710]
Amino acid sequence
Length: 2,125
>KH.L96.101.v1.A.SL1-1
IVLYELTVAASCAMAEKQSGLKPPSRIGKPGAILMGTKSIPAQKAPSSTNSNSNAASNFI
IGDKVILSGSKVGRIQFLGETEFAPGQWAGIVLEDAVGKNNGSVAGVQYFQCEPMHGVFA
RPSKLVRANNETAGNTTGKSTVTTVKPPSTLSKPKSATAVKTAPLTIANLKASTGETPTH
ERKKKGIRSPASSIRSLKFGGLGDASSVRYNEDIKVGDRVNVGDAKVGTVRFVGETEFAK
GCWVGIELDSAQGKNDGSVAGNRYFTCEANFGLFALRHKVKKVTGTVAKKTAQSAVKKRP
TVKSPGSSASSVSSVTSIPSLRRPSKLQSEVSSRYKQKTAATGVQALQEALVEKQQHVES
LIAERDQEKSELMEVNLTAAMKQDQLNKLQEAHDQFVKEKESQLDQLRRLVEEADLEKVK
LAQDLDEERRKAEDYQFQLEEGQIIKDDMEALTVDDKSELNQLRIERDEAQQQINQLNQQ
VESLTEQVNNSPVFELEEQLLESKSSLEETEATIAQMKINVETAEQENIKLKNLIEDSLQ
KHSEETFELKNQLKILAEKRNEQFTAVDAVAEKERQISSLEQDLLNANQSLESIKEEKKK
TEEEVERMMLEMKSLNEDREKLEQSCKEEIKQKINLQEEVERFKESLDAKDAEFGKIKIS
LDERLKMIEEKDQLCSQLNQKLDVATSCQQQLQTQLNSCNETWQQKFNESNEKVQNLEAT
HETAMQEVETMKSKNELLTKQNVDLQQNLDVMSKQTGDKDQTYNQQLQSARETIEQTTND
LILARQKLEQVEKTNQKLNEALETQLKTLQTEEELRKEKESNVDELNQLILTLKEAAMKH
ETMQAELNEKVETKSKELILLSTKYEELNMQYNVAAEEGGNLREKYLSLEHKETQLEAEV
NKCRTDLDEASKHTESLLQELKSCKERSKSYVEAGDNLAGEMDDLKSEHDKLQKLLEASN
AKVSEQVKHIKELEGRCSMLGEDLKSSESGKGEVMVELQNLKSQNDEIFKELNEAKLSIE
KLRSENVEKQEKMEKIEAANAEDVAEVKKTESEKTEVQKSLENLKTDLKKVNSEFSEVKS
KLEEENKELESKNAELVISVADLSEKSHQVSSELDELKSKHETLQLSVQQQKQCTELSGN
FSNLEIEFEGIKTGLSKERARAEELDSKCQELTEKCEKVNSEKVAVTEELEGSRRSLKEM
TAQLSEQTAKAKKLDSKFQELTEKYEKQNSENVVVTEELESSRRSLKEMTAELADQTAKA
KKLDSKFQELTEKYEKQNSEKLVVTEELESSRRSLKEMTAELADVKLQKELLSTNAEDID
AKTMQVKAMYDEVLQQNDQLSVQLQTVVTEKNQIQSDLETQVKSSNDEKQQSEQKLVQVE
EELTQLKSQLELKCEENSTLDSRCSELTSKLEKLETENKNEIESRVKAVEEAEINIRKLQ
EEKEAMLIQCNDFESELQSTRSKLELTASEYDNLQVEIKKTESEKTEVKKSLENLKTDLE
KVNSQFSEAKSMLEDENKELESKNAELVFSVADLSEKSHQVSSELDELKSKHETLVASYD
ESKKNKDEVERKLDQVNQDHLAVLSEMEKLKLEKQNLEASLCEKNQLLQSSSQEQTQKLV
QVEEELTQLKSQLELKCEENSTLDSRCSEFTSKLEKLETENKKEIESRVKAVEEAEINIR
KLQEEKDAIVKQCNDFESELQSTRSKLELTASECDNLQVEIKKTESEKTEVENSLENLKT
DLEKVNSEFSEAKLKLEEENAELVISVADLSEKSHQVSSELDELKSKHETLVASHDESKK
NKDEVERKLDQVNQDHLAVLSEMEKLKLEKQNLEASLCEKNQLLQSSNQKVSEDASEIQK
TLLQCQTENNTLSERIMNVENENKNFKTEEETLQAKVKKLEASLSLSVTAEEEREKVLKR
EFASERDSLQRSLDITTKLIEERTKEAESYIKEITRLKSEQVLVKTLQDQVTKLEQQKVE
LNVQVTTLQQSNHSNQLSNNHQADNGGGDAGQVDFLNKVIIDQQQKIKMLTDKIEELEGM
MLDDGAGGEEAEYNGESRKLAPRLFCDICDVFDAHDTEDCPTQSMMEPDPAGASQHYERG
EGRAYCEDCEVFGHWTDDCEEQQIF
Nucleotide sequence
Length: 6,773
>KH2012:KH.L96.101.v1.A.SL1-1
ATTGTTTTGTATGAGTTAACCGTTGCTGCTAGTTGCGCGATGGCGGAAAAGCAATCTGGT
TTAAAACCTCCGTCGAGAATAGGAAAGCCTGGTGCAATATTAATGGGAACAAAAAGTATT
CCCGCACAAAAGGCACCTTCATCTACAAATAGTAACTCCAATGCTGCATCGAACTTTATT
ATAGGTGACAAAGTAATACTGAGTGGGTCAAAAGTTGGTCGCATTCAGTTCTTGGGTGAG
ACAGAATTTGCTCCTGGTCAATGGGCAGGTATTGTATTAGAAGATGCAGTGGGAAAGAAT
AATGGATCCGTGGCTGGTGTGCAATATTTTCAGTGTGAACCTATGCATGGTGTGTTTGCA
AGACCAAGTAAACTGGTTCGAGCTAACAATGAAACTGCTGGAAACACCACAGGCAAATCC
ACAGTTACTACAGTAAAACCACCATCTACATTATCCAAACCAAAATCAGCCACTGCTGTC
AAAACTGCTCCTCTTACAATAGCTAACCTCAAAGCATCAACCGGTGAAACTCCTACTCAT
GAAAGAAAGAAAAAAGGTATAAGAAGTCCAGCATCAAGTATTCGAAGCTTAAAGTTTGGA
GGTTTAGGTGATGCTTCTAGTGTTCGTTATAATGAAGATATTAAAGTAGGAGACAGAGTT
AATGTTGGTGACGCAAAAGTTGGAACGGTTCGTTTTGTTGGTGAGACTGAGTTTGCGAAG
GGTTGTTGGGTTGGGATTGAACTTGATTCAGCGCAAGGGAAGAATGATGGATCTGTTGCT
GGAAACAGGTATTTTACCTGTGAGGCAAACTTTGGGCTTTTTGCATTACGCCATAAAGTT
AAAAAAGTGACTGGAACTGTGGCAAAGAAAACAGCACAGAGTGCCGTAAAGAAGAGGCCG
ACAGTTAAATCACCTGGCAGTTCAGCTTCGTCTGTTAGCAGCGTAACTTCAATACCAAGT
CTACGCAGACCATCCAAGTTGCAGTCGGAAGTATCGTCACGATACAAACAGAAGACGGCA
GCTACTGGTGTGCAAGCTCTGCAAGAAGCTTTGGTTGAGAAACAGCAACATGTTGAGTCC
CTGATAGCTGAGAGAGACCAGGAGAAAAGTGAACTTATGGAAGTCAATTTAACCGCTGCG
ATGAAACAAGATCAACTTAATAAACTACAAGAAGCGCATGATCAGTTTGTGAAAGAGAAA
GAATCTCAACTTGACCAACTCCGGAGGTTGGTGGAAGAGGCGGACCTCGAGAAGGTCAAG
TTAGCTCAGGATCTTGACGAGGAGAGAAGGAAAGCGGAGGATTATCAATTCCAACTGGAG
GAAGGACAGATTATCAAAGATGATATGGAGGCGTTAACTGTTGATGATAAATCTGAGTTG
AATCAACTCCGCATTGAAAGAGATGAAGCGCAACAACAAATTAATCAACTAAATCAACAA
GTTGAATCCCTAACTGAGCAAGTTAACAACTCCCCAGTGTTTGAACTTGAGGAACAATTA
CTTGAATCAAAGTCATCATTGGAAGAAACAGAAGCTACAATTGCCCAGATGAAGATAAAT
GTTGAAACAGCTGAACAAGAAAATATTAAACTTAAAAATTTAATTGAGGATTCATTGCAG
AAACACAGCGAGGAAACTTTCGAATTAAAGAATCAGTTGAAAATTCTTGCGGAAAAACGT
AACGAACAGTTTACTGCTGTAGATGCAGTGGCAGAAAAAGAAAGACAAATCTCATCATTG
GAGCAAGATCTTCTGAATGCCAACCAATCTTTGGAAAGTATAAAAGAGGAAAAGAAGAAA
ACGGAAGAAGAGGTTGAGAGGATGATGTTGGAGATGAAGTCTCTCAATGAGGATCGAGAG
AAGTTGGAGCAAAGTTGTAAAGAGGAGATAAAGCAGAAGATCAACCTCCAGGAAGAGGTT
GAGAGGTTCAAAGAGTCCTTGGATGCAAAAGATGCGGAGTTTGGGAAGATCAAGATCAGT
TTAGACGAGAGGTTGAAGATGATTGAAGAGAAAGATCAACTTTGTTCGCAACTTAATCAA
AAGTTGGATGTTGCTACAAGTTGTCAACAACAGCTTCAAACACAACTTAATTCTTGTAAC
GAAACATGGCAACAAAAGTTCAATGAATCAAATGAAAAAGTTCAAAATCTGGAAGCTACT
CATGAAACTGCTATGCAAGAGGTGGAGACAATGAAGTCAAAGAATGAATTGTTGACGAAA
CAAAACGTCGATTTGCAACAAAACCTGGATGTTATGAGTAAACAAACGGGAGACAAAGAC
CAGACTTATAATCAACAATTACAATCAGCAAGAGAAACTATAGAACAAACAACAAACGAT
CTCATTCTAGCCAGACAGAAATTGGAACAAGTCGAAAAAACAAACCAAAAATTAAATGAG
GCTTTGGAAACTCAACTAAAAACACTTCAAACTGAAGAAGAATTGAGGAAAGAAAAAGAA
TCAAATGTTGATGAATTGAACCAATTGATTTTAACTTTAAAAGAGGCTGCCATGAAACAT
GAAACTATGCAAGCTGAGCTGAATGAAAAAGTGGAAACAAAATCAAAGGAATTAATATTG
CTGTCAACTAAATATGAAGAATTAAACATGCAATACAATGTAGCTGCTGAAGAGGGAGGA
AACTTAAGAGAAAAATATCTCAGTCTTGAACATAAAGAAACCCAGCTTGAAGCAGAAGTA
AATAAATGTAGAACGGATTTAGATGAAGCATCAAAGCATACAGAGTCTTTGTTGCAGGAG
CTAAAATCCTGCAAGGAAAGATCAAAATCTTATGTAGAGGCAGGGGACAACTTAGCGGGG
GAAATGGATGATTTGAAATCTGAACACGATAAGCTGCAGAAACTTCTAGAAGCTTCAAAT
GCAAAAGTATCTGAACAAGTTAAACATATAAAGGAGCTTGAAGGAAGGTGTTCTATGTTG
GGGGAAGATTTAAAGAGTTCTGAATCTGGCAAGGGGGAAGTTATGGTGGAGTTGCAGAAC
TTGAAGTCACAGAATGATGAAATATTTAAAGAGCTTAATGAAGCTAAATTGTCAATTGAA
AAGTTGCGATCGGAAAATGTGGAAAAACAAGAAAAGATGGAAAAAATAGAGGCGGCAAAT
GCTGAAGATGTAGCAGAAGTGAAAAAAACGGAATCAGAAAAAACTGAGGTTCAAAAATCA
TTGGAAAATCTGAAAACGGATCTTAAAAAAGTTAATTCTGAGTTTTCTGAAGTAAAATCA
AAGTTAGAAGAAGAAAATAAAGAGTTGGAATCAAAAAATGCTGAACTTGTTATTTCTGTG
GCTGATTTGAGTGAAAAATCTCACCAAGTTTCATCAGAGTTGGATGAACTAAAATCTAAA
CATGAAACTTTACAACTGTCGGTTCAGCAACAAAAACAGTGCACTGAGTTGAGTGGAAAT
TTCTCTAACCTGGAAATTGAGTTTGAGGGAATCAAAACTGGGCTGTCTAAGGAGAGAGCT
AGGGCAGAAGAATTGGATTCAAAATGTCAAGAATTGACAGAAAAATGCGAAAAAGTAAAT
TCTGAAAAGGTTGCTGTTACTGAGGAGCTTGAAGGCTCAAGGCGGAGCTTAAAAGAGATG
ACAGCACAGTTGTCTGAACAGACAGCTAAGGCAAAGAAATTGGATTCAAAATTTCAAGAG
TTGACAGAAAAATACGAAAAACAAAATTCTGAAAACGTGGTTGTTACTGAAGAGCTTGAA
AGCTCAAGGCGAAGCTTAAAAGAGATGACAGCTGAGTTGGCTGATCAGACAGCTAAGGCA
AAGAAATTGGATTCAAAATTTCAAGAGTTGACAGAAAAATACGAAAAACAAAATTCTGAA
AAACTGGTTGTTACTGAAGAGCTTGAAAGCTCAAGGCGAAGCTTAAAAGAGATGACAGCT
GAGTTGGCTGATGTGAAACTACAGAAAGAATTGCTGTCAACCAATGCTGAAGATATTGAT
GCCAAAACTATGCAAGTGAAAGCTATGTATGATGAAGTGCTGCAACAGAATGATCAGTTG
TCTGTTCAATTACAAACTGTTGTTACTGAAAAAAATCAAATACAAAGCGATCTGGAAACT
CAAGTTAAATCTTCAAATGATGAAAAACAACAAAGTGAACAAAAACTTGTTCAAGTTGAA
GAAGAATTAACGCAGTTGAAGTCTCAGCTTGAATTGAAATGTGAGGAAAATTCAACTTTA
GATTCTCGCTGTTCAGAACTTACGAGCAAACTTGAAAAGTTGGAAACAGAAAATAAAAAC
GAAATTGAAAGTCGAGTTAAAGCTGTTGAAGAAGCTGAAATTAATATCAGGAAATTACAA
GAAGAAAAAGAAGCAATGCTTATACAGTGCAATGATTTTGAATCTGAATTACAAAGTACG
CGTAGCAAATTAGAACTCACTGCCTCAGAATACGATAATCTGCAAGTTGAGATCAAAAAA
ACTGAATCAGAAAAAACTGAAGTTAAAAAATCATTGGAAAATCTAAAAACTGACCTTGAA
AAAGTTAATTCCCAGTTTTCTGAAGCGAAATCGATGTTAGAAGACGAAAATAAAGAGTTG
GAATCAAAAAATGCTGAACTTGTTTTTTCTGTGGCTGATTTGAGTGAAAAATCTCACCAA
GTTTCATCAGAGTTGGATGAATTGAAATCTAAACATGAAACTTTGGTTGCAAGTTATGAT
GAAAGTAAGAAGAACAAAGATGAAGTTGAGAGGAAGTTGGATCAAGTCAATCAAGATCAT
CTTGCTGTTTTAAGTGAGATGGAAAAGTTGAAATTGGAAAAACAAAATCTTGAAGCAAGT
CTTTGCGAGAAAAATCAACTTTTACAATCGTCAAGTCAGGAACAAACACAGAAACTTGTT
CAGGTTGAAGAAGAATTGACGCAGTTGAAGTCTCAGCTTGAATTGAAATGTGAGGAAAAT
TCAACTTTAGATTCTCGCTGTTCAGAATTCACAAGCAAACTTGAAAAGTTGGAGACAGAA
AATAAAAAGGAAATTGAAAGTCGAGTGAAAGCTGTTGAAGAAGCTGAAATTAATATCAGG
AAATTACAAGAAGAAAAAGATGCAATCGTTAAACAGTGCAATGATTTTGAATCTGAATTA
CAAAGTACGCGTAGCAAATTAGAACTCACTGCCTCAGAATGCGATAATCTGCAAGTTGAG
ATCAAAAAAACTGAATCAGAAAAAACTGAAGTTGAAAACTCATTGGAAAATCTAAAAACT
GATCTTGAAAAAGTTAATTCTGAGTTTTCTGAAGCGAAATTGAAGTTAGAAGAAGAAAAT
GCTGAACTTGTTATTTCTGTGGCTGATTTGAGTGAAAAATCTCACCAAGTTTCATCAGAG
TTGGATGAATTGAAATCTAAACATGAAACTTTGGTTGCAAGTCATGATGAAAGTAAGAAG
AACAAAGATGAAGTTGAGAGGAAGTTGGATCAAGTCAATCAAGATCATCTTGCTGTTTTA
AGTGAGATGGAAAAGTTGAAATTGGAAAAACAAAATCTCGAAGCAAGTCTTTGTGAGAAA
AATCAACTTTTACAATCATCCAACCAAAAAGTATCAGAGGATGCATCAGAAATACAGAAA
ACCTTGCTTCAATGTCAAACTGAGAATAATACTTTAAGTGAAAGAATCATGAACGTCGAA
AACGAAAATAAAAACTTTAAAACTGAAGAGGAAACATTGCAAGCAAAGGTCAAGAAGTTA
GAAGCAAGTTTAAGTCTGAGTGTTACAGCAGAAGAAGAAAGAGAAAAAGTCTTGAAACGA
GAATTTGCGTCTGAACGTGATTCGCTTCAGCGGTCGCTTGACATCACCACTAAACTTATC
GAGGAAAGAACGAAAGAAGCAGAAAGTTACATTAAAGAGATTACTCGCTTAAAATCTGAA
CAAGTTCTTGTAAAGACGTTGCAAGACCAAGTTACAAAGTTGGAGCAGCAGAAAGTTGAA
TTGAATGTTCAAGTTACAACATTACAACAAAGTAACCATAGCAACCAACTTTCGAATAAC
CACCAAGCTGATAATGGGGGTGGTGATGCTGGGCAGGTTGACTTTCTCAACAAAGTGATC
ATTGATCAGCAACAGAAGATAAAGATGCTCACTGATAAGATTGAAGAGTTAGAAGGAATG
ATGTTGGATGATGGAGCTGGGGGGGAGGAAGCAGAATATAATGGCGAATCACGAAAACTT
GCCCCTCGATTATTTTGCGATATTTGCGATGTATTTGACGCTCACGATACGGAGGATTGC
CCGACGCAGAGCATGATGGAGCCAGATCCTGCAGGGGCGTCTCAACATTATGAAAGGGGG
GAGGGAAGAGCTTACTGTGAGGACTGCGAAGTATTTGGGCATTGGACAGACGATTGTGAA
GAGCAGCAGATTTTCTGAAGATCCTGTCATAACCTGGGAGTTCCATTTCTGTTTCTTCAT
ATTTTTATTGTGGCTTTCATGCACTACCCTGCTTTCTTTAGCTGACTCTTTTCTTAAAGA
GTAAATTGTGTTCCTTTACTGCAGGTACTATAGTTCATTGTAAGTTTTTCAGATAATTTC
TAATATACTATTTGTTCTGCCTCTAAAATATTGAAAACTTGACTTTTTCACCATTTGTTT
CAAAACACACTCAAACTAATTACGTCACTGTTTGTTTAGCAACTTGATTTTTAAAACATT
TTTTAAATTTAGATAGAAAAGCCATAAAGTGTAGGGCAACAACGTGTTAATATATTTTAC
ATATACCTTGTTTTGTCTTATTTCACAGCAAATAAATGACTAGTTGGTGGAAT
| Gene3D |
CAP-Gly_dom_sf (IPR036859) - T[37-135] 3.0E-30 - T[202-290] 1.8E-29 |
| SUPERFAMILY |
CAP-Gly_dom_sf (IPR036859) - T[47-152] 4.19E-30 - T[208-332] 2.88E-31 |
| SMART |
CAP-Gly_domain (IPR000938) - T[61-126] 2.7E-30 - T[216-281] 5.8E-30 |
| Pfam |
CAP-Gly_domain (IPR000938) - T[61-125] 3.0E-19 - T[216-280] 9.8E-23 |
| ProSitePatterns |
CAP-Gly_domain (IPR000938) - T[79-110] . - T[234-265] . |
| ProSiteProfiles |
CAP-Gly_domain (IPR000938) - T[79-121] 16.576 - T[234-276] 15.631 |
| Pfam |
CLIP1_ZNF (IPR032108) - T[2063-2080] 3.4E-7 - T[2103-2119] 3.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLIP1_HUMAN | 43.478 % | 353 | 1.87E-99 |
| CLIP3_HUMAN | 35.374 % | 157 | 7.28E-40 |
| CLIP2_HUMAN | 37.912 % | 308 | 8.37E-87 |