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- Transcript 'KH2012:KH.L96.101.v1...'
Transcript Model
Transcript Id
KH2012:KH.L96.101.v1.A.SL2-1
Possible name(s)
CLIP1; CLIP2; CLIP3
Gene model
Location
KhL96 [544,068 / 564,758]
Amino acid sequence
Length: 2,125
>KH.L96.101.v1.A.SL2-1
IVLYELTVAASCAMAEKQSGLKPPSRIGKPGAILMGTKSIPAQKAPSSTNSNSNAASNFI
IGDKVILSGSKVGRIQFLGETEFAPGQWAGIVLEDAVGKNNGSVAGVQYFQCEPMHGVFA
RPSKLVRANNETAGNTTGKSTVTTVKPPSTLSKPKSATAVKTAPLTIANLKASTGETPTH
ERKKKGIRSPASSIRSLKFGGLGDASSVRYNEDIKVGDRVNVGDAKVGTVRFVGETEFAK
GCWVGIELDSAQGKNDGSVAGNRYFTCEANFGLFALRHKVKKVTGTVAKKTAQSAVKKRP
TVKSPGSSASSVSSVTSIPSLRRPSKLQSEVSSRYKQKTAATGVQALQEALVEKQQHVES
LIAERDQEKSELMEVNLTAAMKQDQLNKLQEAHDQFVKEKESQLDQLRRLVEEADLEKVK
LAQDLDEERRKAEDYQFQLEEGQIIKDDMEALTVDDKSELNQLRIERDEAQQQINQLNQQ
VESLTEQVNNSPVFELEEQLLESKSSLEETEATIAQMKINVETAEQENIKLKNLIEDSLQ
KHSEETFELKNQLKILAEKRNEQFTAVDAVAEKERQISSLEQDLLNANQSLESIKEEKKK
TEEEVERMMLEMKSLNEDREKLEQSCKEEIKQKINLQEEVERFKESLDAKDAEFGKIKIS
LDERLKMIEEKDQLCSQLNQKLDVATSCQQQLQTQLNSCNETWQQKFNESNEKVQNLEAT
HETAMQEVETMKSKNELLTKQNVDLQQNLDVMSKQTGDKDQTYNQQLQSARETIEQTTND
LILARQKLEQVEKTNQKLNEALETQLKTLQTEEELRKEKESNVDELNQLILTLKEAAMKH
ETMQAELNEKVETKSKELILLSTKYEELNMQYNVAAEEGGNLREKYLSLEHKETQLEAEV
NKCRTDLDEASKHTESLLQELKSCKERSKSYVEAGDNLAGEMDDLKSEHDKLQKLLEASN
AKVSEQVKHIKELEGRCSMLGEDLKSSESGKGEVMVELQNLKSQNDEIFKELNEAKLSIE
KLRSENVEKQEKMEKIEAANAEDVAEVKKTESEKTEVQKSLENLKTDLKKVNSEFSEVKS
KLEEENKELESKNAELVISVADLSEKSHQVSSELDELKSKHETLQLSVQQQKQCTELSGN
FSNLEIEFEGIKTGLSKERARAEELDSKCQELTEKCEKVNSEKVAVTEELEGSRRSLKEM
TAQLSEQTAKAKKLDSKFQELTEKYEKQNSENVVVTEELESSRRSLKEMTAELADQTAKA
KKLDSKFQELTEKYEKQNSEKLVVTEELESSRRSLKEMTAELADVKLQKELLSTNAEDID
AKTMQVKAMYDEVLQQNDQLSVQLQTVVTEKNQIQSDLETQVKSSNDEKQQSEQKLVQVE
EELTQLKSQLELKCEENSTLDSRCSELTSKLEKLETENKNEIESRVKAVEEAEINIRKLQ
EEKEAMLIQCNDFESELQSTRSKLELTASEYDNLQVEIKKTESEKTEVKKSLENLKTDLE
KVNSQFSEAKSMLEDENKELESKNAELVFSVADLSEKSHQVSSELDELKSKHETLVASYD
ESKKNKDEVERKLDQVNQDHLAVLSEMEKLKLEKQNLEASLCEKNQLLQSSSQEQTQKLV
QVEEELTQLKSQLELKCEENSTLDSRCSEFTSKLEKLETENKKEIESRVKAVEEAEINIR
KLQEEKDAIVKQCNDFESELQSTRSKLELTASECDNLQVEIKKTESEKTEVENSLENLKT
DLEKVNSEFSEAKLKLEEENAELVISVADLSEKSHQVSSELDELKSKHETLVASHDESKK
NKDEVERKLDQVNQDHLAVLSEMEKLKLEKQNLEASLCEKNQLLQSSNQKVSEDASEIQK
TLLQCQTENNTLSERIMNVENENKNFKTEEETLQAKVKKLEASLSLSVTAEEEREKVLKR
EFASERDSLQRSLDITTKLIEERTKEAESYIKEITRLKSEQVLVKTLQDQVTKLEQQKVE
LNVQVTTLQQSNHSNQLSNNHQADNGGGDAGQVDFLNKVIIDQQQKIKMLTDKIEELEGM
MLDDGAGGEEAEYNGESRKLAPRLFCDICDVFDAHDTEDCPTQSMMEPDPAGASQHYERG
EGRAYCEDCEVFGHWTDDCEEQQIF
Nucleotide sequence
Length: 6,821
>KH2012:KH.L96.101.v1.A.SL2-1
CAAGCATTTTTAGTTCAGGCATATTATTTCAAAGGACTTTAATTTTAGATTGTTTTGTAT
GAGTTAACCGTTGCTGCTAGTTGCGCGATGGCGGAAAAGCAATCTGGTTTAAAACCTCCG
TCGAGAATAGGAAAGCCTGGTGCAATATTAATGGGAACAAAAAGTATTCCCGCACAAAAG
GCACCTTCATCTACAAATAGTAACTCCAATGCTGCATCGAACTTTATTATAGGTGACAAA
GTAATACTGAGTGGGTCAAAAGTTGGTCGCATTCAGTTCTTGGGTGAGACAGAATTTGCT
CCTGGTCAATGGGCAGGTATTGTATTAGAAGATGCAGTGGGAAAGAATAATGGATCCGTG
GCTGGTGTGCAATATTTTCAGTGTGAACCTATGCATGGTGTGTTTGCAAGACCAAGTAAA
CTGGTTCGAGCTAACAATGAAACTGCTGGAAACACCACAGGCAAATCCACAGTTACTACA
GTAAAACCACCATCTACATTATCCAAACCAAAATCAGCCACTGCTGTCAAAACTGCTCCT
CTTACAATAGCTAACCTCAAAGCATCAACCGGTGAAACTCCTACTCATGAAAGAAAGAAA
AAAGGTATAAGAAGTCCAGCATCAAGTATTCGAAGCTTAAAGTTTGGAGGTTTAGGTGAT
GCTTCTAGTGTTCGTTATAATGAAGATATTAAAGTAGGAGACAGAGTTAATGTTGGTGAC
GCAAAAGTTGGAACGGTTCGTTTTGTTGGTGAGACTGAGTTTGCGAAGGGTTGTTGGGTT
GGGATTGAACTTGATTCAGCGCAAGGGAAGAATGATGGATCTGTTGCTGGAAACAGGTAT
TTTACCTGTGAGGCAAACTTTGGGCTTTTTGCATTACGCCATAAAGTTAAAAAAGTGACT
GGAACTGTGGCAAAGAAAACAGCACAGAGTGCCGTAAAGAAGAGGCCGACAGTTAAATCA
CCTGGCAGTTCAGCTTCGTCTGTTAGCAGCGTAACTTCAATACCAAGTCTACGCAGACCA
TCCAAGTTGCAGTCGGAAGTATCGTCACGATACAAACAGAAGACGGCAGCTACTGGTGTG
CAAGCTCTGCAAGAAGCTTTGGTTGAGAAACAGCAACATGTTGAGTCCCTGATAGCTGAG
AGAGACCAGGAGAAAAGTGAACTTATGGAAGTCAATTTAACCGCTGCGATGAAACAAGAT
CAACTTAATAAACTACAAGAAGCGCATGATCAGTTTGTGAAAGAGAAAGAATCTCAACTT
GACCAACTCCGGAGGTTGGTGGAAGAGGCGGACCTCGAGAAGGTCAAGTTAGCTCAGGAT
CTTGACGAGGAGAGAAGGAAAGCGGAGGATTATCAATTCCAACTGGAGGAAGGACAGATT
ATCAAAGATGATATGGAGGCGTTAACTGTTGATGATAAATCTGAGTTGAATCAACTCCGC
ATTGAAAGAGATGAAGCGCAACAACAAATTAATCAACTAAATCAACAAGTTGAATCCCTA
ACTGAGCAAGTTAACAACTCCCCAGTGTTTGAACTTGAGGAACAATTACTTGAATCAAAG
TCATCATTGGAAGAAACAGAAGCTACAATTGCCCAGATGAAGATAAATGTTGAAACAGCT
GAACAAGAAAATATTAAACTTAAAAATTTAATTGAGGATTCATTGCAGAAACACAGCGAG
GAAACTTTCGAATTAAAGAATCAGTTGAAAATTCTTGCGGAAAAACGTAACGAACAGTTT
ACTGCTGTAGATGCAGTGGCAGAAAAAGAAAGACAAATCTCATCATTGGAGCAAGATCTT
CTGAATGCCAACCAATCTTTGGAAAGTATAAAAGAGGAAAAGAAGAAAACGGAAGAAGAG
GTTGAGAGGATGATGTTGGAGATGAAGTCTCTCAATGAGGATCGAGAGAAGTTGGAGCAA
AGTTGTAAAGAGGAGATAAAGCAGAAGATCAACCTCCAGGAAGAGGTTGAGAGGTTCAAA
GAGTCCTTGGATGCAAAAGATGCGGAGTTTGGGAAGATCAAGATCAGTTTAGACGAGAGG
TTGAAGATGATTGAAGAGAAAGATCAACTTTGTTCGCAACTTAATCAAAAGTTGGATGTT
GCTACAAGTTGTCAACAACAGCTTCAAACACAACTTAATTCTTGTAACGAAACATGGCAA
CAAAAGTTCAATGAATCAAATGAAAAAGTTCAAAATCTGGAAGCTACTCATGAAACTGCT
ATGCAAGAGGTGGAGACAATGAAGTCAAAGAATGAATTGTTGACGAAACAAAACGTCGAT
TTGCAACAAAACCTGGATGTTATGAGTAAACAAACGGGAGACAAAGACCAGACTTATAAT
CAACAATTACAATCAGCAAGAGAAACTATAGAACAAACAACAAACGATCTCATTCTAGCC
AGACAGAAATTGGAACAAGTCGAAAAAACAAACCAAAAATTAAATGAGGCTTTGGAAACT
CAACTAAAAACACTTCAAACTGAAGAAGAATTGAGGAAAGAAAAAGAATCAAATGTTGAT
GAATTGAACCAATTGATTTTAACTTTAAAAGAGGCTGCCATGAAACATGAAACTATGCAA
GCTGAGCTGAATGAAAAAGTGGAAACAAAATCAAAGGAATTAATATTGCTGTCAACTAAA
TATGAAGAATTAAACATGCAATACAATGTAGCTGCTGAAGAGGGAGGAAACTTAAGAGAA
AAATATCTCAGTCTTGAACATAAAGAAACCCAGCTTGAAGCAGAAGTAAATAAATGTAGA
ACGGATTTAGATGAAGCATCAAAGCATACAGAGTCTTTGTTGCAGGAGCTAAAATCCTGC
AAGGAAAGATCAAAATCTTATGTAGAGGCAGGGGACAACTTAGCGGGGGAAATGGATGAT
TTGAAATCTGAACACGATAAGCTGCAGAAACTTCTAGAAGCTTCAAATGCAAAAGTATCT
GAACAAGTTAAACATATAAAGGAGCTTGAAGGAAGGTGTTCTATGTTGGGGGAAGATTTA
AAGAGTTCTGAATCTGGCAAGGGGGAAGTTATGGTGGAGTTGCAGAACTTGAAGTCACAG
AATGATGAAATATTTAAAGAGCTTAATGAAGCTAAATTGTCAATTGAAAAGTTGCGATCG
GAAAATGTGGAAAAACAAGAAAAGATGGAAAAAATAGAGGCGGCAAATGCTGAAGATGTA
GCAGAAGTGAAAAAAACGGAATCAGAAAAAACTGAGGTTCAAAAATCATTGGAAAATCTG
AAAACGGATCTTAAAAAAGTTAATTCTGAGTTTTCTGAAGTAAAATCAAAGTTAGAAGAA
GAAAATAAAGAGTTGGAATCAAAAAATGCTGAACTTGTTATTTCTGTGGCTGATTTGAGT
GAAAAATCTCACCAAGTTTCATCAGAGTTGGATGAACTAAAATCTAAACATGAAACTTTA
CAACTGTCGGTTCAGCAACAAAAACAGTGCACTGAGTTGAGTGGAAATTTCTCTAACCTG
GAAATTGAGTTTGAGGGAATCAAAACTGGGCTGTCTAAGGAGAGAGCTAGGGCAGAAGAA
TTGGATTCAAAATGTCAAGAATTGACAGAAAAATGCGAAAAAGTAAATTCTGAAAAGGTT
GCTGTTACTGAGGAGCTTGAAGGCTCAAGGCGGAGCTTAAAAGAGATGACAGCACAGTTG
TCTGAACAGACAGCTAAGGCAAAGAAATTGGATTCAAAATTTCAAGAGTTGACAGAAAAA
TACGAAAAACAAAATTCTGAAAACGTGGTTGTTACTGAAGAGCTTGAAAGCTCAAGGCGA
AGCTTAAAAGAGATGACAGCTGAGTTGGCTGATCAGACAGCTAAGGCAAAGAAATTGGAT
TCAAAATTTCAAGAGTTGACAGAAAAATACGAAAAACAAAATTCTGAAAAACTGGTTGTT
ACTGAAGAGCTTGAAAGCTCAAGGCGAAGCTTAAAAGAGATGACAGCTGAGTTGGCTGAT
GTGAAACTACAGAAAGAATTGCTGTCAACCAATGCTGAAGATATTGATGCCAAAACTATG
CAAGTGAAAGCTATGTATGATGAAGTGCTGCAACAGAATGATCAGTTGTCTGTTCAATTA
CAAACTGTTGTTACTGAAAAAAATCAAATACAAAGCGATCTGGAAACTCAAGTTAAATCT
TCAAATGATGAAAAACAACAAAGTGAACAAAAACTTGTTCAAGTTGAAGAAGAATTAACG
CAGTTGAAGTCTCAGCTTGAATTGAAATGTGAGGAAAATTCAACTTTAGATTCTCGCTGT
TCAGAACTTACGAGCAAACTTGAAAAGTTGGAAACAGAAAATAAAAACGAAATTGAAAGT
CGAGTTAAAGCTGTTGAAGAAGCTGAAATTAATATCAGGAAATTACAAGAAGAAAAAGAA
GCAATGCTTATACAGTGCAATGATTTTGAATCTGAATTACAAAGTACGCGTAGCAAATTA
GAACTCACTGCCTCAGAATACGATAATCTGCAAGTTGAGATCAAAAAAACTGAATCAGAA
AAAACTGAAGTTAAAAAATCATTGGAAAATCTAAAAACTGACCTTGAAAAAGTTAATTCC
CAGTTTTCTGAAGCGAAATCGATGTTAGAAGACGAAAATAAAGAGTTGGAATCAAAAAAT
GCTGAACTTGTTTTTTCTGTGGCTGATTTGAGTGAAAAATCTCACCAAGTTTCATCAGAG
TTGGATGAATTGAAATCTAAACATGAAACTTTGGTTGCAAGTTATGATGAAAGTAAGAAG
AACAAAGATGAAGTTGAGAGGAAGTTGGATCAAGTCAATCAAGATCATCTTGCTGTTTTA
AGTGAGATGGAAAAGTTGAAATTGGAAAAACAAAATCTTGAAGCAAGTCTTTGCGAGAAA
AATCAACTTTTACAATCGTCAAGTCAGGAACAAACACAGAAACTTGTTCAGGTTGAAGAA
GAATTGACGCAGTTGAAGTCTCAGCTTGAATTGAAATGTGAGGAAAATTCAACTTTAGAT
TCTCGCTGTTCAGAATTCACAAGCAAACTTGAAAAGTTGGAGACAGAAAATAAAAAGGAA
ATTGAAAGTCGAGTGAAAGCTGTTGAAGAAGCTGAAATTAATATCAGGAAATTACAAGAA
GAAAAAGATGCAATCGTTAAACAGTGCAATGATTTTGAATCTGAATTACAAAGTACGCGT
AGCAAATTAGAACTCACTGCCTCAGAATGCGATAATCTGCAAGTTGAGATCAAAAAAACT
GAATCAGAAAAAACTGAAGTTGAAAACTCATTGGAAAATCTAAAAACTGATCTTGAAAAA
GTTAATTCTGAGTTTTCTGAAGCGAAATTGAAGTTAGAAGAAGAAAATGCTGAACTTGTT
ATTTCTGTGGCTGATTTGAGTGAAAAATCTCACCAAGTTTCATCAGAGTTGGATGAATTG
AAATCTAAACATGAAACTTTGGTTGCAAGTCATGATGAAAGTAAGAAGAACAAAGATGAA
GTTGAGAGGAAGTTGGATCAAGTCAATCAAGATCATCTTGCTGTTTTAAGTGAGATGGAA
AAGTTGAAATTGGAAAAACAAAATCTCGAAGCAAGTCTTTGTGAGAAAAATCAACTTTTA
CAATCATCCAACCAAAAAGTATCAGAGGATGCATCAGAAATACAGAAAACCTTGCTTCAA
TGTCAAACTGAGAATAATACTTTAAGTGAAAGAATCATGAACGTCGAAAACGAAAATAAA
AACTTTAAAACTGAAGAGGAAACATTGCAAGCAAAGGTCAAGAAGTTAGAAGCAAGTTTA
AGTCTGAGTGTTACAGCAGAAGAAGAAAGAGAAAAAGTCTTGAAACGAGAATTTGCGTCT
GAACGTGATTCGCTTCAGCGGTCGCTTGACATCACCACTAAACTTATCGAGGAAAGAACG
AAAGAAGCAGAAAGTTACATTAAAGAGATTACTCGCTTAAAATCTGAACAAGTTCTTGTA
AAGACGTTGCAAGACCAAGTTACAAAGTTGGAGCAGCAGAAAGTTGAATTGAATGTTCAA
GTTACAACATTACAACAAAGTAACCATAGCAACCAACTTTCGAATAACCACCAAGCTGAT
AATGGGGGTGGTGATGCTGGGCAGGTTGACTTTCTCAACAAAGTGATCATTGATCAGCAA
CAGAAGATAAAGATGCTCACTGATAAGATTGAAGAGTTAGAAGGAATGATGTTGGATGAT
GGAGCTGGGGGGGAGGAAGCAGAATATAATGGCGAATCACGAAAACTTGCCCCTCGATTA
TTTTGCGATATTTGCGATGTATTTGACGCTCACGATACGGAGGATTGCCCGACGCAGAGC
ATGATGGAGCCAGATCCTGCAGGGGCGTCTCAACATTATGAAAGGGGGGAGGGAAGAGCT
TACTGTGAGGACTGCGAAGTATTTGGGCATTGGACAGACGATTGTGAAGAGCAGCAGATT
TTCTGAAGATCCTGTCATAACCTGGGAGTTCCATTTCTGTTTCTTCATATTTTTATTGTG
GCTTTCATGCACTACCCTGCTTTCTTTAGCTGACTCTTTTCTTAAAGAGTAAATTGTGTT
CCTTTACTGCAGGTACTATAGTTCATTGTAAGTTTTTCAGATAATTTCTAATATACTATT
TGTTCTGCCTCTAAAATATTGAAAACTTGACTTTTTCACCATTTGTTTCAAAACACACTC
AAACTAATTACGTCACTGTTTGTTTAGCAACTTGATTTTTAAAACATTTTTTAAATTTAG
ATAGAAAAGCCATAAAGTGTAGGGCAACAACGTGTTAATATATTTTACATATACCTTGTT
TTGTCTTATTTCACAGCAAATAAATGACTAGTTGGTGGAAT
| Gene3D |
CAP-Gly_dom_sf (IPR036859) - T[37-135] 3.0E-30 - T[202-290] 1.8E-29 |
| SUPERFAMILY |
CAP-Gly_dom_sf (IPR036859) - T[47-152] 4.19E-30 - T[208-332] 2.88E-31 |
| SMART |
CAP-Gly_domain (IPR000938) - T[61-126] 2.7E-30 - T[216-281] 5.8E-30 |
| Pfam |
CAP-Gly_domain (IPR000938) - T[61-125] 3.0E-19 - T[216-280] 9.8E-23 |
| ProSitePatterns |
CAP-Gly_domain (IPR000938) - T[79-110] . - T[234-265] . |
| ProSiteProfiles |
CAP-Gly_domain (IPR000938) - T[79-121] 16.576 - T[234-276] 15.631 |
| Pfam |
CLIP1_ZNF (IPR032108) - T[2063-2080] 3.4E-7 - T[2103-2119] 3.2E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLIP1_HUMAN | 43.478 % | 353 | 1.87E-99 |
| CLIP3_HUMAN | 35.374 % | 157 | 7.28E-40 |
| CLIP2_HUMAN | 37.912 % | 308 | 8.37E-87 |