- Transcript 'KH2012:KH.L9.8.v3.R....'
Transcript Model
Transcript Id
KH2012:KH.L9.8.v3.R.ND2-1
Possible name(s)
ASH1L; PHF20; PHF20L1
Gene model
Location
KhL9 [27,489 / 37,194]
Amino acid sequence
Length: 312
>KH.L9.8.v3.R.ND2-1
ASSVGCQRITTSLMKLWKLRAAAPQSRRTVAPRSRRDKAEKELVNEDVVRCGCGAEVEGG
FMIQCEGCLTWQHALCEGISPNNEVPPVNYVCKVCKDPPGVRRSQKFLFNNEFLVKGIPP
TITNNNEATTEQKKFQNFMEATHALVDEVMSVKEALRGIRQQIIIADPTSVHPMLKLWDL
KDSKTIEEKKQKVVTEKKVEGVKESEVESGNLESESTDKSALWRPIEVTRGQMTSSSDVA
TENDVVAARCRGNILAHIDHMESVLSKRTSQLEDYVTEIEKGKIPSRLDGLASVKSDVDS
IHKLLSEAITSQ
Nucleotide sequence
Length: 2,345
>KH2012:KH.L9.8.v3.R.ND2-1
ACCAATCAGAATAAAGCAGTGACGCCTGAAAAGAAAAAGAGCGAGGTAAATAAAGATGGA
GCATCTAAACAAGGGGATTTCCCCGTTCTGTTTACGAAAGGAAGTTCAGTGTTGGCGCGA
TGGAAAGATTGTAGAAGTTACCCCGGGACTATACTTGCTGTGCATGACGATGGTCAATAC
ACTGTACAATATTACGACGGGATGACAAACCGTGTTCGCAAGGAAATGGTGAAAGCTTGG
GATTCGACGGCGATACCGAAGGAAAAAAGGGGAAGGCCGAAGGTCAAAGAAAGTGTTAGA
CCAGAAGTAAACATCAGCAAAGGAACAATACCAACATCAGTTGTTACAACTACTAATGAT
AATGAGGATGAAAGCAAAACTATCAAATGCAAAGTACCTGGATGTTCAAAGATCTTCCGC
AACCAAGGATCGTTGAAACAACATCAGAAACATTTCCACCACAAAAGATACAAATTGAGA
GACGGGAGCCCTCCGAAGAGGAAGGCTTCGAAAGACGAGAAAGAAGTGAGCGTCAAGCGT
CGGGTGTCAGCGGATTACCACAAGTCTCATGAAGCTATGGAAGTTAAGAGCCGCGGCACC
ACGGAGCCAAAGAACCGTGGCACCACGGAGCCGAAGAGCCGCGGTGGGAAGCCGGTGATT
GAGATTCTACGAATGCAACAAGATCTTCTGCATGATGAAGAAACTTCCGTGGAAAGTTGG
GAAAAGCAAAAGGTGGATGGAAGATCTGGTAGCGATGCTAAATCATCCGATGATCAGAAA
GTTGCTGCTGTGGAAGTACAGGTCAATACACTGTACAATATTACGACGGGATGACAAACC
GTGTTCGCAAGGAAATGGTGAAAGCTTGGGATTCAACGGCGATACCGAAGGAAAAAAGGG
GAAGGCCGAAGGTCAAAGAAAGTGTTAGACCAGAAGTAAACATCAGCAAAGGAACAATAC
CAACATCAGTTGTTACAACTACTAATGATAATGAGGATGAAAGCAAAACTATCAAATGCA
AAGTACCTGGATGTTCAAAGATCTTCCGAAACCAAGGATCGTTGAAACAACATCAGAAAC
ATTTCCACCACAAAAGATACAAACTGAGAGACGGGAGCCCTCCGAAGAGGAAGGCTTCGA
AAGACGAGAAAGAAGTGAGCGTCAAGCGTCGGGTGTCAGCGGATTACCACAAGTCTCATG
AAGCTATGGAAGTTAAGAGCCGCGGCACCACAGAGCCGAAGAACCGTGGCACCACGGAGC
CGAAGAGATAAAGCTGAGAAAGAGCTGGTGAACGAAGATGTTGTTAGGTGTGGATGTGGT
GCTGAGGTAGAAGGAGGGTTCATGATCCAGTGTGAAGGTTGCCTCACATGGCAACATGCG
TTGTGTGAAGGTATCTCTCCTAACAATGAGGTTCCACCCGTCAACTATGTTTGTAAAGTA
TGTAAGGATCCACCAGGTGTGAGAAGGTCGCAGAAATTTCTCTTTAACAACGAATTCCTG
GTTAAGGGAATTCCCCCCACCATAACCAACAACAATGAAGCGACAACAGAACAAAAGAAA
TTCCAGAACTTCATGGAGGCCACCCATGCGTTGGTAGACGAGGTAATGAGCGTAAAGGAA
GCTCTTCGTGGGATTCGGCAACAAATTATCATCGCGGACCCAACATCGGTGCATCCTATG
CTTAAGTTATGGGATTTAAAAGATTCAAAAACTATAGAAGAAAAAAAACAAAAAGTTGTG
ACAGAGAAAAAAGTAGAGGGAGTAAAGGAAAGTGAAGTTGAATCCGGTAATCTCGAATCG
GAATCGACGGACAAGAGCGCCCTCTGGCGACCGATTGAGGTCACACGAGGTCAAATGACG
TCATCGAGCGACGTCGCTACGGAGAATGACGTCGTCGCTGCTCGTTGTCGTGGCAACATA
CTTGCACATATCGACCACATGGAGTCAGTATTGAGCAAACGGACGAGCCAGCTGGAAGAC
TACGTCACAGAAATTGAAAAAGGAAAGATCCCGTCACGCCTCGATGGGTTGGCTTCGGTC
AAAAGCGACGTCGATTCAATTCACAAACTTCTATCTGAAGCTATTACGTCACAGTAACCA
TTGTGTCAGCTAACAACGTCATAAACGGACTTTTACAACATCCGGGGTGATGAGCCAACT
TTGGCCGAAATCCCTCGGCTGCTGTTTATAATGTATATTACAACAATCATACCATGACGT
CACAACGTTTGTGACGTCATAAAATATGGCGTAACCTTCTCTGACGTCACACGGAGAATC
GGCGCGTCGGTGATCTCGTGATTTTTAGTTGTTTGTTTTAAAATCGCGAAAAATTGTGAA
AAATA
| PANTHER |
PHF20 (IPR037915) - T[31-221] 8.6E-31 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[39-112] 1.3E-16 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[41-102] 9.26E-15 |
| SMART |
Znf_PHD (IPR001965) - T[50-96] 8.1E-8 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[50-96] 1.1E-9 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[51-95] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P20L1_HUMAN | 39.007 % | 98.2 | 1.28E-22 |
| PHF20_HUMAN | 37.879 % | 91.3 | 2.24E-20 |