Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L98.1.v2.A.SL4-1

Possible name(s)

PLPBP

Gene model

KH2012:KH.L98.1

Location

KhL98 [19,489 / 22,353]

Sequences

Amino acid sequence

Length: 272

>KH.L98.1.v2.A.SL4-1
FEQIQVHNHAINSILQIMKYKIMPQVFPDIAANLAGIRTGIDSAVQKRPQTVPTVQPILV
AVSKTKPLSLIKQAYDAGQRHFGENYLKELVVKSNSPDMAELCPDIKWHYIGTFQKKMAS
VLMRVSNLHMLETLNGAKEADAVNSRWKSTEPLQVLVQVNTSGEESKSGVTASECTELAG
HIHRNCSNLKLAGLMTIGSFGYDCTQGPNPDFTKLAECRKTVCKELGIPEKDLQLSMGMS
HDYTHAIEMGSTMVRVGTAIFGARDYNKTEEQ

Nucleotide sequence

Length: 890

>KH2012:KH.L98.1.v2.A.SL4-1
TTTTGAGCAAATTCAGGTCCACAATCATGCAATAAATAGTATTTTGCAAATTATGAAATA
TAAAATCATGCCACAAGTTTTTCCAGATATTGCCGCAAATTTAGCAGGAATTCGAACGGG
TATTGACAGTGCAGTACAGAAAAGACCCCAGACAGTTCCTACAGTGCAACCAATACTTGT
AGCAGTCAGTAAGACCAAACCACTCAGTTTAATCAAGCAAGCATATGATGCGGGCCAGCG
TCATTTTGGCGAGAATTACCTAAAAGAATTGGTTGTGAAATCCAACAGCCCTGACATGGC
TGAGCTCTGCCCTGACATCAAGTGGCATTACATTGGAACCTTCCAGAAGAAAATGGCAAG
CGTGCTCATGCGCGTGTCGAACCTGCATATGCTTGAGACACTGAATGGCGCCAAAGAGGC
AGACGCAGTAAACAGCAGGTGGAAATCTACTGAACCGTTACAAGTTCTTGTGCAAGTTAA
CACCAGTGGAGAAGAAAGTAAAAGCGGAGTAACTGCTTCAGAGTGTACGGAACTGGCGGG
TCACATACACAGAAACTGCTCTAACCTAAAACTAGCCGGCCTTATGACCATTGGCTCTTT
TGGATATGACTGTACTCAAGGCCCCAACCCAGATTTTACCAAGCTGGCAGAGTGCAGAAA
AACAGTGTGTAAAGAATTAGGTATTCCTGAAAAAGATTTGCAGCTAAGTATGGGCATGTC
TCATGACTACACACATGCGATTGAAATGGGCAGTACTATGGTCAGAGTCGGTACCGCAAT
TTTTGGGGCAAGAGATTACAACAAAACTGAAGAACAATAACTCTTGTGTGCTTGCTTATT
TATTTTAGTTGAATACACAAAGAAAAACTAATTTTTGTTGAAATTTTTGA

InterProScan

Gene3D	PLP-binding_barrel (IPR029066) - T[19-271] 7.9E-81
PIRSF	PyrdxlP_homeostasis (IPR011078) - T[22-270] 4.0E-67
SUPERFAMILY	PLP-binding_barrel (IPR029066) - T[24-262] 7.29E-65
PANTHER	PyrdxlP_homeostasis (IPR011078) - T[29-270] 6.6E-99
TIGRFAM	PyrdxlP_homeostasis (IPR011078) - T[29-264] 1.9E-56
Hamap	PyrdxlP_homeostasis (IPR011078) - T[32-263] 28.072
Pfam	Ala_racemase_N (IPR001608) - T[57-264] 3.4E-23

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PLPHP_HUMAN	52.479 %	271	2.01E-91