- Clone 'cicl015i04' >
- Transcript 'KH2012:KH.S1019.1.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1019.1.v1.A.ND1-1
Possible name(s)
CD22; PRTG; PXDN
Gene model
Location
KhS1019 [33 / 11,877]
Amino acid sequence
Length: 543
>KH.S1019.1.v1.A.ND1-1
TVNAQAPFTFSALSLQPPISSVGSNATATCNVTYTASTTATLRWKINDVEIGTYRIKNNQ
VPQYVNLASSYDTSSSTTTSIVNTNDTFPMSLEIRNVNLTLNQSTVSLSCSAVGCITQVQ
LQIKECSSPTPNNVPVNPSSGVYNTQANFQCSHGSTLFNMDGTTGNTATKCLATAEWENE
NIVQCWSAPTATLIGNNTICAGNIATFQCNASGGVPSLDRVEIYFNNQNQTLVGNTWTSN
PLSSSNNGDIVECRAINSYTAMQKYSNLGRDSKTLIIHYASTNPKFETKFTDLLINSSSD
YLIRSDETLTMNCSADGNPAVTCTWTCSPTNCGSLPNTCEINNVNVTGSTTITCTVGNGV
CGGGTTSITQHITVVSKTRDPYFVIDGDVSTAISITRNKTESLSLVCAIPNQKEMNTNII
LKKDGIINFGSDNVTINNLSPEDTGSYSCHTSDAFGNFSSSLYVDVYYAAEGFAVNDGTT
SHSNICTWYIAPPGPRSCTITFSLNPTTYTTTLTKDGAMVTNDATNQPQTSTSQSFVFTR
NQV
Nucleotide sequence
Length: 1,633
>KH2012:KH.S1019.1.v1.A.ND1-1
TACAGTAAATGCCCAAGCTCCATTCACATTCTCTGCGTTATCTCTACAACCCCCAATATC
ATCAGTTGGATCAAATGCCACTGCTACTTGTAATGTGACTTATACTGCAAGTACAACAGC
TACATTAAGATGGAAAATAAATGATGTGGAAATTGGTACGTACAGAATTAAAAACAATCA
AGTTCCACAATATGTAAATCTAGCTTCGAGTTATGACACATCATCAAGCACAACTACATC
CATTGTTAACACTAATGACACTTTCCCCATGAGCCTTGAAATCAGGAATGTTAATTTGAC
CCTCAATCAATCAACAGTTTCGCTCAGTTGTTCGGCAGTCGGTTGTATCACTCAAGTTCA
GTTACAAATCAAAGAGTGTTCATCTCCAACACCCAACAATGTTCCAGTCAACCCATCAAG
TGGTGTCTACAACACTCAAGCTAACTTCCAGTGTTCCCATGGGTCAACTTTATTTAATAT
GGATGGAACAACTGGAAACACTGCAACCAAATGCCTTGCTACAGCAGAGTGGGAGAATGA
AAATATAGTTCAATGTTGGTCAGCACCAACTGCTACATTGATTGGCAACAATACCATTTG
TGCTGGAAACATTGCTACATTCCAATGTAATGCATCTGGGGGTGTTCCTTCTTTGGACAG
AGTTGAAATTTATTTCAATAATCAAAACCAAACGTTGGTTGGAAACACATGGACAAGCAA
TCCACTGAGTAGTTCAAACAATGGAGATATAGTGGAATGTAGAGCTATAAATAGCTACAC
TGCCATGCAGAAATATTCAAACTTGGGAAGGGACAGCAAGACATTGATTATACACTATGC
ATCAACGAATCCAAAGTTTGAAACCAAATTCACGGATCTGTTGATCAATTCAAGCAGTGA
TTACCTGATTAGATCAGATGAGACTTTGACCATGAATTGCTCAGCTGATGGAAACCCTGC
TGTAACTTGTACCTGGACTTGTTCTCCTACAAATTGTGGTAGTTTACCAAACACTTGTGA
GATCAACAATGTAAATGTTACTGGTTCCACAACCATCACATGTACGGTTGGTAATGGTGT
TTGTGGAGGTGGTACTACCAGTATTACTCAACACATAACAGTGGTATCTAAAACTAGAGA
TCCATATTTTGTAATTGATGGTGATGTTTCGACAGCTATTTCTATCACAAGAAACAAAAC
AGAGAGTTTAAGTTTAGTCTGTGCGATTCCCAACCAGAAGGAAATGAACACAAATATAAT
TTTGAAGAAAGATGGAATTATAAACTTCGGATCAGACAATGTGACCATAAACAATCTATC
CCCAGAAGATACAGGATCATATTCTTGTCACACAAGCGATGCTTTTGGAAATTTTTCATC
ATCTTTATACGTTGATGTATATTATGCAGCTGAAGGATTTGCAGTGAATGATGGTACAAC
TAGCCACAGTAACATATGTACATGGTATATTGCCCCACCTGGTCCAAGATCATGTACCAT
CACATTCTCACTTAACCCAACTACTTATACAACCACTTTAACAAAGGATGGAGCCATGGT
AACGAATGATGCAACTAATCAGCCACAAACATCAACATCACAAAGTTTTGTTTTTACTCG
AAACCAGGTTTGA
| SMART |
Ig_sub (IPR003599) - T[15-124] 56.0 - T[298-375] 25.0 - T[392-467] 1.7E-4 |
| PANTHER |
Myelin_P0-rel (IPR000920) - T[20-282] 1.9E-59 - T[307-353] 1.9E-59 - T[356-460] 1.9E-59 - T[465-543] 1.9E-59 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[124-187] 7.971 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[284-465] 8.393 |
| Gene3D |
Ig-like_fold (IPR013783) - T[291-380] 5.1E-5 - T[382-472] 3.9E-7 |
| Pfam |
Ig-like_dom (IPR007110) - T[298-362] 3.4E-6 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[298-345] 2.57E-8 - T[423-468] 2.57E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|