Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Moocci.CG.ELv1_2.S62...' > 
  2. Clone 'ma005k05' > 
  3. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.L106.19.v1...' > 
  5. Transcript 'KH2012:KH.S1061.1.v1...'

Transcript Model

Transcript Id

KH2012:KH.S1061.1.v1.A.SL1-1

Possible name(s)

CLEC4C; CLEC6A; OLR1

Gene model

KH2012:KH.S1061.1

Location

KhS1061 [1,146 / 2,620]

Sequences

Amino acid sequence

Length: 115

>KH.S1061.1.v1.A.SL1-1
NFELTYKIMFSVLILLNLIVATSTTDSWHQLDGIEYYIEYTAVDGVDKANESCQSMDAIL
AVVNSRRIQDFLVKNIDTTKLTGKPYSFFIGLSRTSPTTLQWSDGTTTDTSVFTY

Nucleotide sequence

Length: 679

>KH2012:KH.S1061.1.v1.A.SL1-1
AATGGTAGAATTTTGAGTTAACATACAAAATTATGTTTTCCGTTTTGATTCTGTTAAATT
TAATCGTCGCAACATCAACCACTGATAGTTGGCATCAACTTGATGGCATCGAATATTACA
TTGAGTATACAGCAGTGGATGGAGTTGATAAAGCTAACGAAAGTTGTCAATCAATGGACG
CCATTCTAGCTGTTGTTAATTCTCGACGAATTCAAGATTTTCTCGTGAAAAATATTGATA
CGACTAAGTTAACAGGTAAACCATATTCCTTCTTCATTGGTTTGAGTCGTACCAGTCCAA
CTACATTGCAATGGTCGGATGGAACAACAACTGATACATCAGTCTTCACTTATTGAGATA
ACAACGATGACATTTATGATTCCACCAAACTTTGTGTTACTATGGGATGGGATGGAGCTT
TTGACGAATCATTTAAGTGGAAGATCGTACGTTGCGGCGATACCCATCGTTTTATTTGTC
AAAAAAATGCTAAAACAACTACAGAAGCAACAACTGAAGTACAAACGACAACAAACAGTG
AAAGGGGGTATACCGAGACTACTTCTGGTATAGAACATAAGGAAACAAGTGGTTCGAGTG
CGGGTCTTTATGCAGCTACAAGTGTTGGGGCAGTCATTGTCATCGTATTATGTGGAGTAA
TCTGCATAAAGTATTACAG

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[20-115] 3.2E-12
SUPERFAMILY
CTDL_fold (IPR016187) - T[21-113] 1.26E-14
Pfam
C-type_lectin-like (IPR001304) - T[46-113] 2.7E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value