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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S1.g...' > 
  2. Transcript 'KH2012:KH.C4.208.v1....' > 
  3. Transcript 'KH2012:KH.L96.28.v4....' > 
  4. Clone 'cima865255' > 
  5. Transcript 'KH2012:KH.S1136.2.v1...'

Transcript Model

Transcript Id

KH2012:KH.S1136.2.v1.A.ND1-1

Possible name(s)

PTGR1; PTGR2; ZADH2

Gene model

KH2012:KH.S1136.2

Location

KhS1136 [6,697 / 8,738]

Sequences

Amino acid sequence

Length: 340

>KH.S1136.2.v1.A.ND1-1
RLVTTVEQGITMVRSKYFTKAQEFDGMPKLTDFKIIDEEIDDNLKEGEVVGEALCASVDP
FIRAYPVPPGAPIIGFQVLKVTKSMNKKYPVGCKVMGFSGWRTICKLSDADVWYKVNEGQ
NPTVSLGALGMPGMTAYCGFLDICKPQAGETVMVNGCAGAVGNLVGQIAKIKGCKVIGCC
GSDEKVKFAKSLGFDQVFNYKTCKFYPKTLKELAPDGIDCFFDNVGYDVGGQLSSDIMGC
MNKGGRIAVCGAITSYNSKQPPMATMVQGLMVFKLLTMRGFLVQQYKDKFPEALVEMQQW
IKEGKIKIHETPSSGFENIPRSFIDMLSGGNIGKAVVVMS

Nucleotide sequence

Length: 1,098

>KH2012:KH.S1136.2.v1.A.ND1-1
CGGCTTGTCACAACTGTAGAACAAGGAATCACGATGGTTCGCTCAAAGTATTTTACCAAA
GCCCAGGAATTTGATGGAATGCCAAAGTTGACAGATTTTAAAATTATTGATGAAGAGATC
GATGACAACTTGAAGGAAGGAGAGGTTGTTGGTGAGGCATTATGCGCCAGTGTGGACCCG
TTCATTAGGGCTTACCCTGTCCCTCCCGGCGCTCCAATTATTGGCTTTCAAGTGTTGAAA
GTGACGAAAAGTATGAACAAGAAGTACCCGGTTGGCTGCAAAGTAATGGGGTTTAGTGGT
TGGCGAACGATATGCAAGTTATCCGATGCTGATGTTTGGTATAAAGTTAATGAAGGACAA
AACCCAACCGTATCACTGGGCGCGCTGGGCATGCCAGGGATGACGGCTTATTGCGGGTTC
CTCGATATTTGTAAACCGCAAGCTGGTGAGACCGTGATGGTGAACGGGTGTGCTGGGGCT
GTGGGTAACTTGGTGGGCCAAATTGCCAAGATAAAGGGTTGCAAAGTAATCGGGTGTTGT
GGAAGCGACGAAAAAGTAAAGTTCGCGAAATCTCTGGGATTCGACCAAGTGTTTAATTAT
AAAACCTGCAAATTTTACCCGAAAACTTTGAAGGAGTTGGCACCTGATGGAATCGATTGT
TTCTTTGACAATGTTGGTTATGATGTTGGAGGACAATTGTCGTCTGACATTATGGGTTGC
ATGAACAAAGGTGGAAGAATCGCCGTGTGCGGAGCCATTACATCCTACAACTCCAAACAA
CCACCTATGGCCACAATGGTGCAAGGCTTGATGGTATTCAAACTGCTCACTATGAGAGGA
TTCCTTGTGCAACAATATAAGGATAAATTCCCAGAAGCTTTGGTGGAAATGCAACAGTGG
ATCAAAGAGGGCAAAATCAAGATCCATGAAACCCCCTCGAGTGGTTTTGAGAATATTCCG
CGTTCGTTCATTGACATGTTGAGTGGGGGAAACATTGGGAAGGCTGTGGTTGTGATGTCA
TAATCGTAGTTGTGATGTCATAATTGTGGATGTGATATTGGAATATTGTGATTGTAATAA
TTAAAGCAATATACCTCA

InterProScan

SUPERFAMILY
GroES-like_sf (IPR011032) - T[12-145] 2.83E-22
CDD
PTGR1 (IPR014190) - T[13-339] 3.15835E-180
SMART
PKS_ER (IPR020843) - T[26-337] 1.2E-5
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[125-304] 9.64E-49
Pfam
ADH_C (IPR013149) - T[160-296] 5.1E-23

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PTGR3_HUMAN 30.556 % 91.7 9.98E-21
PTGR1_HUMAN 44.578 % 269 8.0E-89
PTGR2_HUMAN 34.32 % 174 9.25E-52