- Transcript 'KH2012:KH.S1136.6.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1136.6.v1.A.nonSL4-1
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
KhS1136 [2,371 / 4,132]
Amino acid sequence
Length: 393
>KH.S1136.6.v1.A.nonSL4-1
SCYVMAEISTSSDDVTKASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQ
GNDVIGLAETGSGKTGAFCIPKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRIL
NMDFESELDTILKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQ
YYLFLPSKDKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAVPLHGQMSQA
KRLGALNKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRF
GKSVTFVTQYDVELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEMKERGSK
KRGAVASDSEELADQNIGKHKIYAKKGKKMKRK
Nucleotide sequence
Length: 1,348
>KH2012:KH.S1136.6.v1.A.nonSL4-1
ATAGTTGTTACGTCATGGCTGAGATTAGTACATCATCGGATGACGTAACAAAGGCATCAA
CAGAAGCTGTTGTGACGTTCCAATCCTTAGGCGTCGTCGATGTTTTGTGCGAAACATGCG
ACAAACTGGGATGGAAGAAGCCATCGAAGATACAAGAAGAGGCGATACCTGTTGCGTTAC
AGGGAAACGATGTGATCGGGCTGGCGGAGACCGGATCTGGGAAAACGGGAGCTTTTTGCA
TTCCTAAACCTCATGTGGTCGTGGCAACCCCTGGTAGGCTTGTTGACCATCTTGAAAAGA
CGAAAGGCTTCACGTTGCGTTCGATCAAGTTTCTAGTGTTAGATGAAGCTGACAGGATTC
TTAATATGGACTTTGAAAGCGAACTTGACACAATACTAAAAGTTATCCCGCGCGAACGAA
GAACTTTCTTGTTTTCTGCCACGATGACGGGGAAAGTGAAAAAGTTGCAACGAGCTGCAT
TGACCAAACCTGTGAAATGTGCAGTGAATAACAAATATCACACCGTGGATAAACTGTTCC
AATATTATCTGTTCCTTCCATCCAAGGATAAAGATTGTTATCTTGCAGCTGTCGTGAATG
AACTGGCGGGCAACGCGATGATCATATTCTGTGGTACATGCGCAAACACACAACGCACAG
CGCTAATATTGCGCAATCTCGGAATATCCGCCGTGCCACTCCATGGGCAAATGTCGCAAG
CCAAGAGGTTGGGGGCTTTGAATAAATTTAAGAGCGCGACAAAGTCCATCCTCGTGGCGA
CCGATGTTGCGAGCAGGGGGCTTGACATCCCTCATGTGGACGTTGTCATCAACATGGACG
TACCCGCTCGTTCTAAAGACTACATACATCGGGTTGGACGAACCGCTCGTGCGGGAAGGT
TCGGGAAGTCCGTCACATTTGTAACGCAATATGATGTTGAATTGTATCAGAGAATCGAGG
AATTGATCGGGAAGAAACTCCCGGAGTACGAGATGGAGCATAATGAGGTGAAAGTTTTAC
AAGAGCGAGTTGCTGAAGCGCAACGATTGGCGAGGTTGGAGATGAAGGAGCGGGGATCAA
AGAAGAGGGGAGCGGTTGCGAGTGACTCTGAGGAGCTTGCGGATCAAAACATCGGGAAAC
ATAAAATTTACGCAAAGAAAGGAAAAAAGATGAAGAGAAAATAAATTGTTGCAGAATAAA
ACGTTTTATTTTCAAAACTTGATTTAGGAGGAAAATAAAATTGAGTCATGTGAGGTTGTT
GTATAGTTCATATTGTTGAGCTGTGTCTGGATCCACAGTGCAATGGGCCATGAATAACAG
GTTCTGGATCTTATTTTTAATAACCCGT
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[24-52] 8.962 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[43-181] 1.4E-18 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[49-81] 8.5E-10 - T[83-155] 2.7E-17 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[81-166] 17.281 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[82-319] 2.64E-57 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[112-120] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[177-337] 22.385 |
| CDD |
Helicase_C (IPR001650) - T[177-306] 2.40352E-37 |
| Pfam |
Helicase_C (IPR001650) - T[193-298] 2.9E-29 |
| SMART |
Helicase_C (IPR001650) - T[217-298] 1.9E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 41.841 % | 191 | 5.3E-54 |
| DDX47_HUMAN | 68.69 % | 456 | 1.84E-159 |
| DDX49_HUMAN | 41.534 % | 274 | 3.9E-88 |