- Transcript 'KH2012:KH.C2.471.v2....' >
- Transcript 'KH2012:KH.S1136.6.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1136.6.v1.R.ND1-1
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
KhS1136 [2,371 / 4,118]
Amino acid sequence
Length: 389
>KH.S1136.6.v1.R.ND1-1
MAEISTSSDDVTKASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDV
IGLAETGSGKTGAFCIPKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDF
ESELDTILKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLF
LPSKDKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAVPLHGQMSQAKRLG
ALNKFKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSV
TFVTQYDVELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEMKERGSKKRGA
VASDSEELADQNIGKHKIYAKKGKKMKRK
Nucleotide sequence
Length: 1,334
>KH2012:KH.S1136.6.v1.R.ND1-1
ATGGCTGAGATTAGTACATCATCGGATGACGTAACAAAGGCATCAACAGAAGCTGTTGTG
ACGTTCCAATCCTTAGGCGTCGTCGATGTTTTGTGCGAAACATGCGACAAACTGGGATGG
AAGAAGCCATCGAAGATACAAGAAGAGGCGATACCTGTTGCGTTACAGGGAAACGATGTG
ATCGGGCTGGCGGAGACCGGATCTGGGAAAACGGGAGCTTTTTGCATTCCTAAACCTCAT
GTGGTCGTGGCAACCCCTGGTAGGCTTGTTGACCATCTTGAAAAGACGAAAGGCTTCACG
TTGCGTTCGATCAAGTTTCTAGTGTTAGATGAAGCTGACAGGATTCTTAATATGGACTTT
GAAAGCGAACTTGACACAATACTAAAAGTTATCCCGCGCGAACGAAGAACTTTCTTGTTT
TCTGCCACGATGACGGGGAAAGTGAAAAAGTTGCAACGAGCTGCATTGACCAAACCTGTG
AAATGTGCAGTGAATAACAAATATCACACCGTGGATAAACTGTTCCAATATTATCTGTTC
CTTCCATCCAAGGATAAAGATTGTTATCTTGCAGCTGTCGTGAATGAACTGGCGGGCAAC
GCGATGATCATATTCTGTGGTACATGCGCAAACACACAACGCACAGCGCTAATATTGCGC
AATCTCGGAATATCCGCCGTGCCACTCCATGGGCAAATGTCGCAAGCCAAGAGGTTGGGG
GCTTTGAATAAATTTAAGAGCGCGACAAAGTCCATCCTCGTGGCGACCGATGTTGCGAGC
AGGGGGCTTGACATCCCTCATGTGGACGTTGTCATCAACATGGACGTACCCGCTCGTTCT
AAAGACTACATACATCGGGTTGGACGAACCGCTCGTGCGGGAAGGTTCGGGAAGTCCGTC
ACATTTGTAACGCAATATGATGTTGAATTGTATCAGAGAATCGAGGAATTGATCGGGAAG
AAACTCCCGGAGTACGAGATGGAGCATAATGAGGTGAAAGTTTTACAAGAGCGAGTTGCT
GAAGCGCAACGATTGGCGAGGTTGGAGATGAAGGAGCGGGGATCAAAGAAGAGGGGAGCG
GTTGCGAGTGACTCTGAGGAGCTTGCGGATCAAAACATCGGGAAACATAAAATTTACGCA
AAGAAAGGAAAAAAGATGAAGAGAAAATAAATTGTTGCAGAATAAAACGTTTTATTTTCA
AAACTTGATTTAGGAGGAAAATAAAATTGAGTCATGTGAGGTTGTTGTATAGTTCATATT
GTTGAGCTGTGTCTGGATCCACAGTGCAATGGGCCATGAATAACAGGTTCTGGATCTTAT
TTTTAATAACCCGT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[16-77] 3.85E-7 - T[78-315] 2.58E-57 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[20-48] 8.962 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[39-177] 1.4E-18 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[45-77] 8.4E-10 - T[79-151] 2.6E-17 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[77-162] 17.281 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[108-116] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[173-333] 22.385 |
| CDD |
Helicase_C (IPR001650) - T[173-302] 2.47167E-37 |
| Pfam |
Helicase_C (IPR001650) - T[189-294] 2.8E-29 |
| SMART |
Helicase_C (IPR001650) - T[213-294] 1.9E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 41.841 % | 190 | 5.52E-54 |
| DDX47_HUMAN | 73.31 % | 455 | 1.87E-159 |
| DDX49_HUMAN | 41.534 % | 275 | 3.14E-88 |