- Transcript 'KH2012:KH.C4.435.v1....' >
- Transcript 'KH2012:KH.S1136.6.v2...'
Transcript Model
Transcript Id
KH2012:KH.S1136.6.v2.R.ND2-1
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
KhS1136 [2,371 / 4,108]
Amino acid sequence
Length: 445
>KH.S1136.6.v2.R.ND2-1
STSSDDVTKASTEAVVTFQSLGVVDVLCETCDKLGWKKPSKIQEEAIPVALQGNDVIGLA
ETGSGKTGAFCIPVLQALLENPQRLFALVLTPTRELAFQIEEQFKALGSAIGIKTCVVVG
GVDMMGQQIILAKKPHVVVATPGRLVDHLEKTKGFTLRSIKFLVLDEADRILNMDFESEL
DTILKVIPRERRTFLFSATMTGKVKKLQRAALTKPVKCAVNNKYHTVDKLFQYYLFLPSK
DKDCYLAAVVNELAGNAMIIFCGTCANTQRTALILRNLGISAVPLHGQMSQAKRLGALNK
FKSATKSILVATDVASRGLDIPHVDVVINMDVPARSKDYIHRVGRTARAGRFGKSVTFVT
QYDVELYQRIEELIGKKLPEYEMEHNEVKVLQERVAEAQRLARLEMKERGSKKRGAVASD
SEELADQNIGKHKIYAKKGKKMKRK
Nucleotide sequence
Length: 1,504
>KH2012:KH.S1136.6.v2.R.ND2-1
TTAGTACATCATCGGATGACGTAACAAAGGCATCAACAGAAGCTGTTGTGACGTTCCAAT
CCTTAGGCGTCGTCGATGTTTTGTGCGAAACATGCGACAAACTGGGATGGAAGAAGCCAT
CGAAGATACAAGAAGAGGCGATACCTGTTGCGTTACAGGGAAACGATGTGATCGGGCTGG
CGGAGACCGGATCTGGGAAAACGGGAGCTTTTTGCATTCCTGTGTTACAAGCTTTGTTGG
AGAATCCACAGCGGCTGTTTGCATTGGTGTTGACGCCTACAAGGGAATTGGCGTTTCAAA
TTGAGGAACAATTTAAAGCATTGGGTTCGGCAATTGGTATCAAAACATGCGTTGTAGTTG
GGGGAGTTGACATGATGGGTCAACAAATTATATTGGCAAAGAAACCTCATGTGGTCGTGG
CAACCCCTGGTAGGCTTGTTGACCATCTTGAAAAGACGAAAGGCTTCACGTTGCGTTCGA
TCAAGTTTCTAGTGTTAGATGAAGCTGACAGGATTCTTAATATGGACTTTGAAAGCGAAC
TTGACACAATACTAAAAGTTATCCCGCGCGAACGAAGAACTTTCTTGTTTTCTGCCACGA
TGACGGGGAAAGTGAAAAAGTTGCAACGAGCTGCATTGACCAAACCTGTGAAATGTGCAG
TGAATAACAAATATCACACCGTGGATAAACTGTTCCAATATTATCTGTTCCTTCCATCCA
AGGATAAAGATTGTTATCTTGCAGCTGTCGTGAATGAACTGGCGGGCAACGCGATGATCA
TATTCTGTGGTACATGCGCAAACACACAACGCACAGCGCTAATATTGCGCAATCTCGGAA
TATCCGCCGTGCCACTCCATGGGCAAATGTCGCAAGCCAAGAGGTTGGGGGCTTTGAATA
AATTTAAGAGCGCGACAAAGTCCATCCTCGTGGCGACCGATGTTGCGAGCAGGGGGCTTG
ACATCCCTCATGTGGACGTTGTCATCAACATGGACGTACCCGCTCGTTCTAAAGACTACA
TACATCGGGTTGGACGAACCGCTCGTGCGGGAAGGTTCGGGAAGTCCGTCACATTTGTAA
CGCAATATGATGTTGAATTGTATCAGAGAATCGAGGAATTGATCGGGAAGAAACTCCCGG
AGTACGAGATGGAGCATAATGAGGTGAAAGTTTTACAAGAGCGAGTTGCTGAAGCGCAAC
GATTGGCGAGGTTGGAGATGAAGGAGCGGGGATCAAAGAAGAGGGGAGCGGTTGCGAGTG
ACTCTGAGGAGCTTGCGGATCAAAACATCGGGAAACATAAAATTTACGCAAAGAAAGGAA
AAAAGATGAAGAGAAAATAAATTGTTGCAGAATAAAACGTTTTATTTTCAAAACTTGATT
TAGGAGGAAAATAAAATTGAGTCATGTGAGGTTGTTGTATAGTTCATATTGTTGAGCTGT
GTCTGGATCCACAGTGCAATGGGCCATGAATAACAGGTTCTGGATCTTATTTTTAATAAC
CCGT
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[16-44] 8.962 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[35-233] 2.3E-57 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[41-207] 1.8E-49 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[47-218] 32.113 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[85-371] 1.07E-70 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[164-172] . |
| CDD |
Helicase_C (IPR001650) - T[229-358] 9.55632E-37 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[229-389] 22.385 |
| Pfam |
Helicase_C (IPR001650) - T[245-350] 3.6E-29 |
| SMART |
Helicase_C (IPR001650) - T[269-350] 1.9E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 40.443 % | 275 | 1.78E-84 |
| DDX47_HUMAN | 68.68 % | 645 | 0 |
| DDX49_HUMAN | 50 % | 379 | 5.95E-128 |