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  1. Transcript 'KH2012:KH.S115.4.v2....'

Transcript Model

Transcript Id

KH2012:KH.S115.4.v2.A.SL1-2

Possible name(s)

KHDRBS2; KHDRBS3; QKI

Gene model

KH2012:KH.S115.4

Location

KhS115 [103,380 / 119,006]

Sequences

Amino acid sequence

Length: 394

>KH.S115.4.v2.A.SL1-2
RIYSKMQSPMHPMQLQLIHQSAATQQMPQPTHIQIQSPPPPLPKPHNYHQQAVVSPPGSA
SPSSSSSSQPTTNGAVVHEEDRKVRDKCLYLKQLLQDKKQIQNLTGCFLHLDRILDEEIV
KVRSVLFQNGDKQPLELPPPQGPTITLTEKVYVPVKDHPEYNFVGRLLGPRGLTAKQLEQ
ETKCKIMVRGKGSMRDKKKEDLNRGKPNWEHLNDELHVLITVEDTDNRARVKMQRAMEEI
QKLLIPTEGEDELKKKQLMELAIINGTYRDYSALSGQPRLMTAPHQVLQAPALRSPTPGQ
PPLNVYNPIISRLPNGQTVISNGVAQPPPMIAPTDGSLLYYTPFEYPHSALAPALEYNIV
DTNGLLGAACGTKIVRPQAGNRVHPYQRPPGNSP

Nucleotide sequence

Length: 1,964

>KH2012:KH.S115.4.v2.A.SL1-2
CAGCTTTGTTATGTAATTAACGTGTGATTAATCCTACTAATAATTGCTGATTATTATAAG
ACAACTAAACCGCTGCAAACGCTTTCTGACGTCGATTCTGAAAATCAAATCCGAAGAACT
CAATCCATCATTTATCGCGACCTATTACGTCATACCTACGTCACGACTACTACGTCATTG
ACGCATTTATTCCAAGATGCAATCCCCAATGCACCCGATGCAGTTACAACTCATCCACCA
ATCAGCGGCCACCCAACAGATGCCACAACCCACCCATATTCAAATACAGTCCCCGCCCCC
GCCACTCCCCAAACCGCATAACTACCACCAGCAGGCGGTAGTGAGCCCACCGGGATCCGC
CTCCCCATCATCGAGTAGCAGTAGCCAGCCTACCACCAACGGCGCTGTGGTGCACGAAGA
GGACAGGAAGGTGAGGGACAAATGTCTTTACTTGAAACAGCTTCTGCAAGACAAGAAACA
AATCCAGAACCTCACCGGCTGCTTCTTACACCTTGATAGGATACTTGACGAAGAAATCGT
AAAAGTACGATCGGTGTTATTTCAAAATGGAGACAAGCAACCTCTTGAACTTCCCCCTCC
ACAAGGGCCAACTATAACTCTGACTGAGAAGGTGTACGTGCCTGTTAAAGATCATCCAGA
GTACAACTTTGTGGGACGATTGTTGGGACCACGAGGACTGACAGCAAAGCAGTTGGAACA
AGAAACCAAGTGCAAAATAATGGTCAGAGGGAAAGGGTCCATGAGGGACAAGAAAAAGGA
GGATTTAAATCGTGGAAAGCCGAACTGGGAACACTTGAATGATGAACTACATGTGTTGAT
CACAGTCGAGGACACTGACAATCGTGCCAGAGTGAAAATGCAAAGAGCAATGGAAGAAAT
CCAAAAGCTTCTGATTCCCACTGAAGGTGAAGATGAATTAAAGAAGAAACAGTTGATGGA
ACTCGCAATAATCAATGGAACCTACAGAGATTACTCTGCATTATCTGGTCAACCTCGATT
GATGACAGCACCCCACCAAGTGTTGCAAGCTCCAGCATTGAGGTCACCCACACCAGGGCA
ACCGCCACTTAATGTTTACAACCCCATTATATCAAGACTACCTAACGGACAGACTGTAAT
TTCCAATGGAGTGGCCCAGCCCCCTCCCATGATTGCACCAACTGATGGATCACTGTTGTA
TTACACACCATTTGAGTATCCACACTCAGCTCTTGCTCCAGCATTGGAGTATAATATAGT
TGACACCAATGGTTTACTAGGAGCAGCTTGCGGAACTAAAATAGTTAGACCCCAAGCCGG
TAACCGGGTACACCCGTACCAGCGGCCCCCAGGTAATTCCCCTTAACACTTGGTTTATAT
TTTTTCCAGGATTAGGTTAAAGACCACGCAGTATTTATCCGTCCTGCGTTCTGTAGCTTA
ACATAAGATTGCAGTATCTGTACATATATGTGCCTTACTTGTACAACATGCGGTTTATAC
ATTGTATGAAATGACGCGAAGCGCTGATCATTTTTAACTCATCTGGATACAAATGCATTT
TACCAAGCAGTGTATACAAACCACACTAAATCAGCTTGTAGCATTAACTTTTCTAACAAA
TTTTTTGTTGATTAGAAGGTTTTTATATATTTTTTAAAGTTATCCAAAAGAATTTTACTT
TTTGTTTTTACCTACCCATATATCCTTTTCTTCCATGTACTTTCCTAGTCATTTTTATCG
TAATATATTCAGTATTTTTGTATTACTTTGCAATTACTAAGTACTTCTGACACCAAAATA
TGAGTACGTGCAACACTGCTGCCATACGCTGCCCTTTAAAGTGTGCCCTATATTTCAGTC
ATTTATTCTTACAGTGCTGCCGGTTCTAATTATTCCACCAATATTTTAATGTTCCACAGT
TAAAGTGTAAATAAATTTTACCCCAATGTGGGAAACGGTGAAAA

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[85-276] 1.5E-75
Pfam
STAR_dimer (IPR032377) - T[89-130] 3.9E-18
SMART
KH_dom (IPR004087) - T[145-241] 6.2E-9
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[147-269] 4.43E-32
Pfam
KH_dom_type_1 (IPR004088) - T[150-198] 2.1E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDR3_HUMAN 41.206 % 126 4.12E-33
KHDR2_HUMAN 42.778 % 139 5.88E-38
QKI_HUMAN 54.321 % 301 2.05E-100