- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C9.654.v1....' >
- Transcript 'KH2012:KH.C8.248.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.S1206.2.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1206.2.v1.A.nonSL5-1
Possible name(s)
LNX2; LONRF2; RNF146
Gene model
Location
KhS1206 [6,283 / 9,365]
Amino acid sequence
Length: 194
>KH.S1206.2.v1.A.nonSL5-1
TMTEEIDCAICLQPCMQPVELPCSHVFCFLCAKGTALQSRRCALCRSEIPTSFISKPSKF
TKADQTDTPSSSNTNPKYVWFYQGYNGWWQYDERTCAEIEAAYLTEVKSVDLMIAGSVYV
IDFENKVQFQRNRNSRKRKIKRDIVSAPKKGVAGLSYEENSNNQPPACGNKDMASAMHLD
VNDEQSPDNEGQTK
Nucleotide sequence
Length: 1,402
>KH2012:KH.S1206.2.v1.A.nonSL5-1
GTAGATATAAATGAACGTTTTAGGATATGAGTCGTAATTATTCCAAGTACGCACTTAACG
TAGCAAGATTAAGCTCGCGCATATTTTGTGAACCACTTCCTGAATCTGCCAATCGAGGAA
AACACGTCGATAAATATCTGAGGGAGTTACCTTACTATAAAGACAGATCATTCACTCATT
ATTACCCGCCCGTATCAAATATTAATCTTTTACTACGAACACTAAGAAACCACGGACTCT
TTGTAGATGAACATAAAGACTTTAAAGAAGAAATGGAACTTCAAAGAAATCTTCGAGGAA
AAGGAAGATCTTTGAAGAAATCTCTTTAAATTTATTTTAAGCAAACTCGAACTATTGAAA
GACCCTTGCCCGAACAGATTGTTATTATATGATAAACAATGACAGAAGAAATAGATTGCG
CAATCTGTCTCCAACCTTGTATGCAGCCTGTAGAGCTTCCATGCTCGCATGTGTTTTGCT
TCCTATGTGCCAAGGGGACTGCTTTGCAAAGCCGAAGATGCGCTTTGTGTAGATCAGAGA
TACCAACATCCTTTATCTCAAAACCTTCTAAATTTACAAAAGCTGATCAAACAGATACAC
CCAGCAGTTCCAATACCAATCCAAAATATGTTTGGTTCTACCAAGGATACAATGGTTGGT
GGCAATATGATGAACGCACATGTGCTGAAATTGAAGCTGCATACTTAACTGAAGTTAAAT
CAGTTGATCTGATGATCGCTGGTTCTGTTTATGTGATTGACTTTGAAAATAAAGTTCAAT
TTCAACGCAACAGAAATTCTCGAAAAAGAAAAATTAAAAGAGACATTGTTTCTGCCCCGA
AGAAGGGTGTGGCGGGTTTATCATATGAAGAAAACTCAAACAATCAACCACCAGCTTGTG
GAAACAAGGATATGGCTTCTGCAATGCATCTCGATGTAAATGATGAACAGTCACCTGACA
ATGAAGGACAAACAAAATAAGGCGCGATGCAATTTGAAAGATTATTTATGCTTTGTCCAC
TAAGGATGAATGAAATGCTTTTAGTGTTTTTATTAAAGTAAAAACGTTAATAATGTCATC
AAACATCAGTGGAAAAATATTATTACTGTTTAATGCTGTTGTGTTATAACTGAACAATTA
AATTAGTGGAAATATTGATTTTTCCTGTTTTTGTTGGAATAAGAAACAACCTAGTACTTG
GTGTTTCACCACAACAGTTGAAACTGTAATGGAATGTATGTTGCATACATTTTCGCCAAA
GTTGGTATGGCCTTACTATAAATGGAATTACAAATTTTTTTCAACGAGGTTGTTTCACAA
CAGCCTACATAAGCATTGTTCCGGTAACTGCACGTGCGGGTACCCAGTTTAACTACGGAA
ATAAAAAAGAATAGAACGCGCA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[1-76] 1.8E-13 |
| PANTHER |
RNF146 (IPR033509) - T[3-164] 2.0E-70 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[8-46] 10.66 |
| SMART |
Znf_RING (IPR001841) - T[8-45] 1.0E-5 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[23-32] . |
| SUPERFAMILY |
WWE_dom_sf (IPR037197) - T[64-157] 2.88E-28 |
| ProSiteProfiles |
WWE-dom (IPR004170) - T[66-142] 21.105 |
| SMART |
WWE-dom_subgr (IPR018123) - T[75-150] 1.3E-21 |
| Pfam |
WWE-dom (IPR004170) - T[77-142] 5.7E-16 |
| Gene3D |
WWE_dom_sf (IPR037197) - T[77-158] 2.0E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RN146_HUMAN | 51.923 % | 189 | 3.15E-59 |