- Transcript 'KH2012:KH.S1329.1.v1...'
Transcript Model
Transcript Id
KH2012:KH.S1329.1.v1.A.ND1-1
Possible name(s)
CNTN5; HMCN2; PSG3
Gene model
Location
KhS1329 [4,730 / 10,001]
Amino acid sequence
Length: 632
>KH.S1329.1.v1.A.ND1-1
HSNLIQTTSSGCTRGLPMLLSIVLLILYCAEQLSAIQLPQPGNQANVATGTTNLMITATV
TTSPSSCTWSGTGLTSTEFYSSAFGRCKTLTPTATHSITCTNVPGGFSTSLTYLTAMTSN
ASVSLICGSVASVVYSLSMIVKACSSPTPNNVPVNPSSGVYNTRANFQCSHGSTLFYVNG
TTGNTATKCLATAEWENEKIVQCWSAPTTTLIGNNTICAGNIATFQCTTSGGVPSLDRVE
IYFNQQNQTLVGNTWTSNPLSSSNNGDIVECRAINSYTAMQEYTNLGRDSKTLIVHYSAR
NPKFETKFTDLLINSSSDYLLRSDETLTINCSADGNPAVTCNWSCSPTNCGSLPNTCEIN
NLNVVGSTTITCTVGNGVCGGGTTSITQHITVVPKTRVPNIVVDGTTTATSTIKRNKTDS
LSLVCGIQNENEMNTVIVWKKDGFVRSIGSLYIPSVASSDDGLYVCETSDAFGNFSTLVS
LTVFYPAEQFQITNGLGTLCEWGTAGPQYCNITFSLNPVTHSAILKKNGLIADNDFKYKP
QSTNIQNYVFMKNQPTQNDTGSYTLTVTSSTFTPVIFPFTILVSNPIVVPKDNTATIVGA
VLGSIIAILLIIITFLVVKLYRNKKPKTSQP+
Nucleotide sequence
Length: 1,895
>KH2012:KH.S1329.1.v1.A.ND1-1
CACTCAAATTTAATTCAAACAACTTCAAGTGGTTGTACAAGAGGCTTGCCAATGCTGCTT
TCAATTGTGTTGCTGATACTTTACTGTGCTGAACAATTGTCTGCAATTCAATTGCCGCAA
CCTGGAAACCAAGCAAATGTTGCAACTGGAACCACAAACCTCATGATCACTGCAACAGTA
ACAACTAGTCCATCTTCATGTACGTGGTCAGGAACAGGACTAACTAGCACAGAATTTTAC
TCATCGGCTTTTGGTCGATGTAAGACTCTTACACCAACTGCTACACATAGCATTACATGC
ACAAACGTACCTGGGGGCTTTTCTACAAGTCTGACATACCTTACTGCAATGACAAGCAAC
GCCAGCGTTTCACTAATCTGTGGCTCTGTTGCTTCTGTTGTTTACTCATTGTCAATGATA
GTAAAAGCTTGTTCATCTCCAACACCCAACAATGTTCCAGTCAACCCATCAAGTGGTGTC
TACAACACTCGAGCCAACTTCCAGTGTTCCCATGGTTCAACTTTATTTTATGTAAATGGA
ACAACTGGAAACACTGCAACCAAATGCCTTGCTACAGCAGAGTGGGAGAATGAAAAGATA
GTTCAATGTTGGTCAGCACCAACTACTACATTGATTGGCAACAATACCATTTGTGCTGGA
AACATTGCTACATTCCAATGTACTACATCTGGGGGTGTCCCTTCTTTGGACAGAGTTGAA
ATTTATTTCAATCAACAAAATCAAACGTTGGTTGGTAACACATGGACAAGCAATCCACTG
AGTAGTTCAAACAATGGAGATATAGTGGAATGTAGAGCTATAAATAGCTACACTGCCATG
CAGGAATATACAAACTTGGGAAGAGACAGCAAGACATTGATTGTTCATTATTCAGCAAGG
AATCCAAAGTTTGAAACCAAATTCACGGATCTGTTGATCAATTCAAGCAGTGATTACCTG
CTTAGATCAGATGAGACGTTGACCATAAATTGCTCAGCTGATGGAAACCCTGCTGTAACT
TGTAACTGGTCTTGTTCTCCTACAAATTGTGGTAGTTTACCAAACACTTGTGAGATCAAC
AATTTAAATGTTGTTGGTTCCACAACCATCACATGTACGGTTGGTAATGGTGTTTGTGGA
GGTGGTACTACCAGCATTACTCAACACATAACAGTGGTACCTAAAACTAGAGTACCAAAC
ATAGTGGTTGATGGAACAACAACAGCAACTTCTACCATCAAAAGAAACAAAACAGATAGT
TTAAGTTTAGTTTGTGGGATTCAAAACGAGAATGAAATGAACACAGTGATAGTTTGGAAG
AAAGATGGATTTGTTCGTTCAATTGGATCATTATACATACCTAGTGTGGCATCATCAGAT
GATGGTTTATATGTTTGTGAAACATCTGATGCCTTTGGAAACTTTTCTACTTTAGTTAGT
TTGACAGTTTTTTATCCTGCAGAACAGTTTCAAATCACCAATGGCTTGGGCACCTTATGT
GAATGGGGAACTGCTGGGCCACAATATTGTAACATCACATTCTCACTGAATCCAGTTACA
CATTCTGCCATTTTAAAGAAAAATGGGTTGATTGCTGATAATGATTTCAAATATAAACCT
CAGAGCACGAACATTCAAAACTATGTATTCATGAAGAATCAGCCAACTCAAAATGACACT
GGTTCATACACATTGACAGTGACATCATCAACTTTTACTCCTGTCATCTTCCCATTCACA
ATTCTTGTTTCAAATCCTATTGTAGTTCCTAAAGATAACACGGCTACTATTGTTGGGGCA
GTTCTTGGTTCAATAATTGCGATTCTTCTGATCATAATCACATTTCTTGTTGTTAAACTT
TATAGAAACAAGAAACCTAAAACTTCCCAACCAAG
| PANTHER |
Myelin_P0-rel (IPR000920) - T[95-301] 1.5E-77 - T[328-368] 1.5E-77 - T[373-630] 1.5E-77 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[142-205] 8.002 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[302-391] 7.086 - T[399-482] 11.116 |
| SMART |
Ig_sub (IPR003599) - T[316-393] 71.0 - T[410-484] 1.5E-5 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[415-487] 2.0E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|