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  1. Transcript 'Cisavi.CG.ENS81.R106...'
  2. Clone 'cima819824'
  3. Transcript 'KH2012:KH.S391.6.v1....'
  4. Transcript 'Moocul.CG.ELv1_2.S97...'
  5. Transcript 'KH2012:KH.S1380.1.v1...'

Transcript Model

Transcript Id

KH2012:KH.S1380.1.v1.A.ND1-1

Possible name(s)

CD22; HSPG2; PXDN

Location

KhS1380 [2,585 / 7,659]

Sequences

Amino acid sequence

Length: 609

>KH.S1380.1.v1.A.ND1-1
CSSPTPNNVPINPSSGVYNTQANFQCSHGLSLFYLNGTTGNTATKCFATSEWENENIVQC
WSAPTATLIGNNTICAGNIATFQCTASGGVPSWDRVEVYFNNQNQTLVGNTWTSNPLSSS
NNGDIVECRAINSYTAMQEYSNLGRDSKTLIIHYAATNPKFETKFTDLLINLSSGYLLRS
DETLTMNCSADGNPAVTCTWTCSPSNCGSLPNTCEINNVNVINSTTITCTVGNGVCGGGT
TSITQHITVVPKTRDPYIVVDGTTTTATSITRNKTESLSLACGIVNQKEMNTLIVWKKDG
IINFGSDIVTINNLSPEDTGSYSCHTSDAFGNFSSSLYIDVYYAAEGFAVNDGTTSHSNI
CTWYIAPPGPRSCTITFSLNPTTYTTTLTKDGAMVTNDATNQPQTSTSQSFVFTRNQPSF
NDSGNYTLRINNGIFENTFIFYISAINEGQPTTTITPATGGTPPPIPPPDNLGVIIGAAV
GGVVAFLLIIILAVYCLKMQINKIHQDKEVTGRSNIGMEAEHGYYEVANLSAYQNEHVTN
NIPATQSTNYENLKDNVNVTRDERGYVDIQSVGPSIVTTSNDGYEVFIRRNNENTAGNQQ
NESQYEHVA

Nucleotide sequence

Length: 1,925

>KH2012:KH.S1380.1.v1.A.ND1-1
ATGTTCATCTCCAACACCCAACAATGTTCCAATCAACCCATCAAGTGGTGTCTACAACAC
TCAAGCTAACTTCCAGTGTTCCCATGGTTTAAGTTTATTTTATTTAAATGGAACAACTGG
AAACACTGCAACCAAATGTTTTGCTACATCAGAGTGGGAGAATGAAAATATAGTTCAATG
TTGGTCAGCACCAACTGCTACATTGATTGGCAACAATACCATTTGTGCTGGAAACATTGC
TACATTCCAATGTACTGCATCTGGGGGTGTACCTTCTTGGGACAGAGTTGAAGTTTATTT
CAATAACCAAAACCAAACGTTGGTTGGGAACACATGGACAAGCAATCCACTGAGTAGTTC
AAACAATGGAGATATAGTGGAATGTAGAGCTATAAATAGCTACACTGCCATGCAGGAATA
TTCAAACCTGGGAAGAGACAGCAAGACATTGATTATACACTATGCAGCAACGAATCCAAA
GTTTGAAACCAAATTCACGGATCTGTTGATCAATTTAAGCAGTGGTTACCTGCTTAGATC
AGATGAGACGTTGACCATGAATTGCTCAGCTGATGGAAACCCTGCTGTAACTTGTACCTG
GACTTGTTCTCCTTCAAATTGTGGTAGTTTACCAAACACTTGTGAGATCAACAATGTAAA
TGTTATTAATTCCACAACCATCACATGTACGGTTGGTAATGGTGTTTGTGGAGGTGGTAC
TACCAGTATTACTCAACACATAACAGTGGTACCTAAAACTAGAGATCCATATATAGTGGT
CGATGGAACAACAACAACAGCTACTTCTATTACAAGAAACAAAACAGAAAGTTTAAGTTT
AGCCTGTGGGATTGTCAACCAGAAAGAAATGAACACGTTAATAGTTTGGAAGAAAGATGG
AATTATAAACTTCGGATCAGATATTGTGACCATAAACAATCTATCCCCAGAAGATACAGG
ATCATATTCTTGTCACACAAGCGATGCTTTTGGAAATTTTTCATCATCTTTATACATTGA
TGTATATTATGCAGCTGAAGGATTTGCAGTGAATGATGGTACAACTAGCCACAGTAACAT
ATGTACATGGTATATTGCCCCACCTGGTCCAAGATCATGTACCATCACATTCTCACTTAA
CCCAACTACTTATACAACCACTTTAACAAAGGATGGAGCCATGGTAACGAATGATGCAAC
TAATCAGCCGCAAACATCAACATCACAAAGTTTTGTTTTTACTCGAAACCAGCCGTCATT
CAATGATAGTGGGAATTATACATTAAGAATCAACAATGGAATATTTGAAAATACTTTTAT
ATTCTATATATCAGCGATAAATGAAGGGCAACCTACAACAACAATAACACCCGCAACTGG
TGGTACTCCACCACCCATCCCACCACCAGATAACTTGGGTGTTATAATCGGAGCTGCCGT
TGGTGGGGTGGTGGCTTTTTTATTGATCATTATTCTTGCGGTTTATTGTTTAAAGATGCA
AATTAATAAAATACACCAAGATAAAGAAGTTACAGGAAGAAGCAACATTGGAATGGAAGC
AGAGCATGGTTACTATGAAGTTGCTAATCTATCAGCTTATCAGAACGAACACGTAACTAA
TAACATTCCTGCAACACAATCAACGAATTATGAAAATCTAAAGGATAATGTCAATGTAAC
AAGAGATGAGCGAGGTTATGTTGATATACAAAGTGTGGGGCCAAGCATTGTAACAACATC
AAACGATGGATACGAAGTTTTTATCAGAAGAAACAACGAGAATACAGCGGGCAATCAACA
GAACGAAAGTCAATACGAACATGTGGCTTAAAAGTCTTGTACTATAGGAGCTAGGTCGTT
CTTTATTAAGAAAGATTGTGACTATTTCACATTTATACTGTTTGTGCACATATTAAATAT
TTTAT

InterProScan

ProSiteProfiles
Sushi_SCR_CCP_dom (IPR000436) - T[1-62] 8.085
PANTHER
Myelin_P0-rel (IPR000920) - T[35-157] 2.2E-153 - T[185-224] 2.2E-153 - T[230-335] 2.2E-153 - T[341-599] 2.2E-153
ProSiteProfiles
Ig-like_dom (IPR007110) - T[159-248] 7.631 - T[256-340] 10.335
SMART
Ig_sub (IPR003599) - T[173-250] 6.4 - T[267-342] 3.2E-4
SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[174-249] 2.99E-5 - T[266-343] 4.3E-9
Gene3D
Ig-like_fold (IPR013783) - T[252-345] 4.9E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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