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  1. Transcript 'KH2012:KH.C1.90.v1.A...' > 
  2. Transcript 'KH2012:KH.C3.59.v1.A...' > 
  3. Transcript 'KH2012:KH.S406.5.v1....' > 
  4. Transcript 'KH2012:KH.C10.310.v1...' > 
  5. Transcript 'KH2012:KH.S164.4.v2....'

Transcript Model

Transcript Id

KH2012:KH.S164.4.v2.A.ND1-1

Possible name(s)

VPS18

Gene model

KH2012:KH.S164.4

Location

KhS164 [67,949 / 75,528]

Sequences

Amino acid sequence

Length: 606

>KH.S164.4.v2.A.ND1-1
SVPASNLEVMGSRLFAATIVRVSADNTNPFADNSGEVLNIVLTEFHLLLLYSDRLKVICS
LNEQLIFEDVYSSRYGQLRGLVKDPAQGTIWAYTDGAVFKYKVVKESRDVWQMYLDMGKF
DLAREHCRDNPANLDKVLTRQAEHEFSKGQYQESALYYAITQNCFEDVALKFLRAGKEVA
LRAYLQKKLSNLKAGETTQMTMLSTWLVSHLYPLYILKCVAFVCYVLLGDEIIIKSGTCL
SIYKRTKKKYDYERVVNHHIQNEDYTSALDALRKQNSVPLYYKFSPVLMQHIPQTTVNAW
IQLGRRIDPRHIIPSLVNCTERGSETHWMEAIRYLEYCTTELECSDPAIHNYLLSLYAKH
VPNSVISYLRGQGDDSSEICYDVKYALRLCLGNKDPSASETLHQACVHIYTVMALYEEAV
NMALKVDVELAKSIADRRELEEDEETRRKLWLCIAKHIVQEDKDIKRAMKFLQESGDLLK
IEDILPFFPDFVTIDHFKDALCESLAEYNKHIDQLKDEMNEATSSAHSIRANIQETRNRH
LVVGGTDRCQSCDKLLLTRAFYLFPCQHAFHNDCMWKDVRPLLIDSKRDLADRLQQVIPH
IFNRQQ

Nucleotide sequence

Length: 2,118

>KH2012:KH.S164.4.v2.A.ND1-1
TTAGCGTGCCTGCCTCTAACCTAGAGGTAATGGGTTCAAGGCTCTTCGCTGCTACCATTG
TGCGTGTTTCGGCTGACAATACAAATCCTTTTGCTGATAACAGTGGAGAAGTATTAAACA
TTGTCCTTACTGAGTTTCACTTGCTCCTGCTTTATTCTGATCGACTAAAAGTCATTTGTT
CTCTCAACGAACAACTTATATTTGAAGATGTATATAGTTCCAGGTATGGTCAACTGCGCG
GTTTGGTGAAGGACCCTGCTCAGGGCACAATATGGGCATATACCGATGGTGCTGTTTTTA
AGTATAAGGTTGTAAAAGAGTCTCGTGATGTGTGGCAAATGTATCTGGACATGGGAAAAT
TTGATCTGGCTCGTGAACACTGCAGAGACAACCCAGCTAATTTAGATAAAGTGCTGACAC
GACAAGCAGAGCATGAATTCAGCAAAGGTCAATACCAGGAAAGTGCTTTGTATTACGCAA
TTACACAAAACTGTTTTGAGGATGTGGCTTTAAAGTTCCTGAGAGCTGGAAAAGAAGTTG
CGTTGCGGGCTTATCTGCAGAAGAAACTAAGCAATTTAAAGGCAGGTGAAACAACTCAAA
TGACGATGTTATCAACGTGGCTTGTGTCCCATCTGTACCCACTCTATATTCTAAAATGTG
TTGCCTTCGTATGTTATGTACTACTAGGCGATGAAATAATCATTAAAAGTGGGACATGTT
TAAGTATATACAAACGAACAAAAAAAAAGTATGATTACGAGCGTGTAGTAAACCATCACA
TACAAAATGAGGATTATACATCAGCACTCGATGCACTGAGGAAACAAAACTCTGTTCCTT
TGTATTACAAGTTTTCACCAGTGCTAATGCAGCATATTCCCCAAACAACAGTGAACGCAT
GGATTCAATTAGGACGACGCATTGATCCAAGGCACATTATTCCATCCCTTGTTAATTGCA
CTGAGAGAGGTTCAGAAACACACTGGATGGAAGCAATTCGATATTTAGAGTATTGCACAA
CAGAATTGGAATGTAGCGATCCAGCAATTCATAATTATCTACTTTCACTCTACGCAAAAC
ACGTTCCGAATTCAGTAATCAGTTACCTCAGAGGACAGGGTGATGATTCCTCGGAGATAT
GTTACGACGTTAAATACGCACTGCGTCTCTGTCTCGGCAACAAAGATCCAAGTGCAAGTG
AGACGCTACATCAAGCTTGTGTTCATATTTACACTGTCATGGCTTTGTATGAAGAAGCGG
TTAACATGGCTTTAAAGGTTGACGTAGAACTTGCGAAGTCGATTGCTGATCGTCGTGAAT
TAGAAGAAGATGAAGAAACACGGAGGAAGTTGTGGCTCTGCATCGCGAAGCATATTGTGC
AGGAGGACAAGGACATTAAGAGAGCCATGAAGTTTTTACAGGAATCTGGTGACTTGTTGA
AAATTGAAGATATTCTTCCTTTCTTCCCTGATTTTGTGACAATTGATCATTTTAAAGATG
CGTTGTGTGAATCTTTAGCTGAATATAATAAACATATCGACCAGCTTAAAGATGAAATGA
ATGAAGCAACAAGCAGCGCTCATTCTATTCGTGCAAACATACAAGAAACAAGGAATCGTC
ACTTAGTAGTCGGGGGTACAGACAGATGTCAGTCATGTGACAAACTGCTTCTTACCAGAG
CTTTCTACTTGTTTCCATGTCAACATGCTTTCCATAATGATTGCATGTGGAAAGATGTGA
GGCCTCTTCTGATCGACTCAAAACGTGACTTGGCTGACAGACTTCAACAAGTAATTCCCC
ATATTTTTAACCGTCAACAATAACATGTAAACTTTACCTATATTTTTAACTGGAAAAGTA
TATTAATTTGTTAATATTTTATGTCAGAATCAGTGGTTAAGCTTTTAATTGACTTAAATA
TAACTTGCTTTATCTCGTGTGAGCAGAAAACGACAGTTGTTATAATTTGGGTGTTCTGTT
TCATACATCGTAACCAAATGATACCGGTTTGAATGCTCGACGCTGATAGGTAAATATGTC
CTTAAGTCACAGCTGACATTGATTTAACTCGGTGGTCACTAATAAATTACCTAAATTATC
AGCCGTGCAAAAAAAAAA

InterProScan

Pfam
Pep3_Vps18 (IPR007810) - T[32-146] 1.1E-40
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[236-538] 5.3E-8
ProSiteProfiles
Clathrin_H-chain/VPS_repeat (IPR000547) - T[304-467] 18.815
Pfam
VPS39/TGF_beta_rcpt-assoc_2 (IPR019453) - T[470-575] 3.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS18_HUMAN 45.516 % 506 6.17E-169





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