- Transcript 'KH2012:KH.C5.23.v4.A...' >
- Transcript 'Moocci.CG.ELv1_2.S40...' >
- Transcript 'KH2012:KH.C5.23.v2.A...' >
- Region 'REG00000092' >
- Transcript 'KH2012:KH.S215.14.v1...'
Transcript Model
Transcript Id
KH2012:KH.S215.14.v1.A.nonSL4-1
Possible name(s)
CETN1; CETN2; CETN3
Gene model
Location
KhS215 [63,867 / 65,486]
Amino acid sequence
Length: 172
>KH.S215.14.v1.A.nonSL4-1
NIMASGYRKPVGGSTKRKGGARPELTEEQKQEIREAFDLFDSDGSGNIDVKELKVAMRAL
GFEPKKEEIKKMIADVDRDGSGTIDFNDFLTMMTQKMSEKDSKEEILKAFRLFDDDETGK
ISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEVEFLRIMKKTSLY
Nucleotide sequence
Length: 1,619
>KH2012:KH.S215.14.v1.A.nonSL4-1
TTTTAAGGTCGAAATATAGTGAAATATAATGGCTAGTGGATACAGAAAGCCTGTTGGGGG
AAGCACGAAGCGTAAAGGAGGCGCAAGGCCCGAATTAACGGAGGAACAGAAGCAAGAAAT
ACGTGAAGCTTTTGATTTATTTGATTCTGACGGTTCTGGGAATATTGACGTAAAGGAATT
AAAAGTCGCTATGAGGGCTCTGGGCTTTGAGCCGAAAAAAGAAGAAATAAAGAAAATGAT
TGCCGACGTTGACCGAGACGGTAGTGGGACGATTGACTTTAACGACTTTTTGACGATGAT
GACGCAAAAAATGAGCGAAAAAGACTCGAAAGAGGAGATTTTGAAAGCGTTTCGTTTATT
TGATGATGATGAAACCGGGAAAATATCGTTTAAAAACTTGAAGAGGGTCGCTAAAGAGTT
GGGGGAGAACTTGACGGATGAAGAACTGCAAGAGATGATTGATGAGGCGGATCGGGACGG
GGACGGAGAGATAAACGAGGTCGAGTTTTTAAGAATTATGAAGAAAACAAGTTTGTATTG
AAACTTTATTTTTCTTGAAATGAGAAACATTTGCTTTCCAAGAAAATATTATTTATAAGA
AAGAGTCGTTTCCCGCCCAAATTTTGGGTTTCTTTAAAAAAAACGGCCATAAATATTTGA
AAAACGTTTTCAGCTACGTAATTTTGGACTTTTTTTAAAAATTAGTATTAAAAAATTTAT
GGTTTATTGGGTTATAAAGTTTCTAAGCCTTTGTAAAAGTTTTTGGTTTGTTGCCAGCAT
GGGTTGTGTACTGTTGCATGTGGTAGGCTATAGAGCTTAAAACATATGTTGGTGCCAAAC
TTTCTAAACGCAGGGGAGGCAGGGATAGTTAGACACAATCCTGTGAAACAAATCTAACTT
ATTGGTTGTAATGTTTACTGATTAATGCAGTGCAAACAATTCCAGGTTTGGCCTGCCCAC
CCTGCCACCCCAGGTTTGGTGCCTATACATACACATTTAAAATAAGGTCATTCATAAAAC
AAACATATTCTATTTCACCAACCTGGAACTAAATTCATTCATAAACTATGTATATACAAT
ATGTGTTCTAGATGCCCTACCACTTACTTAACACATGGTAAATACATTTATAACATTCAT
ATTCAAATCTACATAAACCATTATTCAGTTTCATTCACATTCCTATCACATGAATAGATA
ACCCACAAACCTATTCATTTCATATTCAGTGTGTTTAGTGTAACATGCATGCTTGAAAAC
TGTGTGCAAATGAAACTTGCACGCAGTTTCATTTACGTGTGAATATTAGACTCATGTTTA
GTCTTATGTTCACACGTTCACAAAAGGGGTCTTGTGTATTAGGTTTGAATTTATCCAAAA
ACAAATCGACAAATAAATCACCTTTAAGAGAAGAGTATATTTATAAGGGTTTAAAATTAT
ATTTTTTTGATTTTATTTTGCTACAAACAATATGAATTGTTAATAACAAAGGAAAAAATG
AATTTTTTGTTGCATTATAATTCCTATTATGATGTCACTATCGTTGTATTGTTGTGTTGA
GTTTCTTTGTAGTTTTAGTTTAAGTTTTGTATGAAATAAAAACAAAAAATATTTCCATA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[24-168] 4.88E-48 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[28-63] 16.885 - T[64-99] 15.183 - T[101-136] 13.928 - T[137-172] 13.955 |
| Pfam |
EF_hand_dom (IPR002048) - T[31-93] 1.1E-15 - T[104-167] 6.6E-12 |
| CDD |
EF_hand_dom (IPR002048) - T[32-94] 1.76077E-20 - T[105-167] 7.57586E-18 |
| SMART |
EF_hand_dom (IPR002048) - T[32-60] 1.2E-7 - T[68-96] 5.6E-8 - T[105-133] 0.0014 - T[141-169] 4.1E-7 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[41-53] . - T[77-89] . - T[150-162] . |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[145-153] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CETN1_HUMAN | 82.558 % | 283 | 3.57E-99 |
| CETN2_HUMAN | 79.07 % | 273 | 2.02E-95 |
| CETN3_HUMAN | 59.615 % | 177 | 1.27E-57 |