- Transcript 'KH2012:KH.S389.1.v1....'
Transcript Model
Transcript Id
KH2012:KH.S389.1.v1.B.SL1-1
Possible name(s)
NCL; RBM3; SART3
Gene model
Location
KhS389 [64,626 / 72,293]
Amino acid sequence
Length: 478
>KH.S389.1.v1.B.SL1-1
IFLVGFFLIYSNKTMVQLKKKSKSDKTSVIKPVKVTKAKKENVEMKKGKKSKKVAAEPEA
TNEENELLKQEVENEENDEKVVKTEDSDDEQEESADESSDDDDSEEEEKVKPKVAKKESK
SKAKKVVKESDEESDDDDDDSEEEEEEEKEDESDEESEDEDEDEDDDDNDDDDEENEEEV
KLVKRKATETEEVATKKVKLDPSEVATLLFTELPEGLNDAVFNKFLKSKEIKCVACRANY
GRQKAYVDVRAEDKDAALQLHQVEWKGQEIQVTEAQSKAQDRKGGDFASNRNDKDERTLF
VKNLPYSADENAIAELFDGVKEVRLLTDRESGRPKGMAFIEFDSTAEKETAFGLKDELEM
DGRSLYLDNVTGGGGGGRGRGNRGGRGGFGRGGGGFGAGRGRGGRGPSAPSKTLFVKGIT
EDMTRDTLYETFSGATDIRIPQDRDTGKNKFFAYVEYQSESSATEVYKSSKGGMHVD+
Nucleotide sequence
Length: 1,520
>KH2012:KH.S389.1.v1.B.SL1-1
ATTGCCAATAAACTGTTAAGGGAGTCTCTAGTGCTGATATAGTTTTATATTATACTTATA
TCATTTGTTTAGATTTAGATAATACTTAAATTTTTCTGGTTGGTTTCTTCCTGATTTATT
CAAACAAAACAATGGTTCAACTGAAGAAAAAATCAAAGAGTGATAAAACATCAGTGATAA
AACCAGTGAAAGTAACAAAGGCTAAAAAAGAGAACGTTGAAATGAAAAAGGGAAAGAAAA
GCAAAAAAGTTGCCGCCGAACCTGAAGCAACAAACGAAGAAAATGAATTACTGAAGCAAG
AAGTTGAGAATGAGGAAAATGATGAAAAAGTTGTAAAAACTGAAGACTCCGATGATGAGC
AAGAGGAAAGTGCGGATGAAAGTTCTGATGATGACGATTCGGAAGAAGAAGAAAAAGTAA
AGCCAAAAGTAGCAAAGAAAGAAAGTAAAAGTAAGGCTAAAAAAGTTGTCAAAGAAAGTG
ATGAAGAATCTGATGATGATGATGATGATTCTGAGGAGGAAGAAGAAGAAGAGAAAGAGG
ATGAGAGTGATGAGGAGAGTGAAGATGAAGATGAAGATGAAGACGACGACGACAATGATG
ATGATGATGAGGAAAATGAGGAAGAGGTGAAGTTAGTCAAGCGGAAAGCAACTGAAACTG
AAGAAGTTGCGACGAAGAAAGTCAAACTTGATCCATCAGAAGTTGCCACCTTACTTTTCA
CTGAGCTACCAGAGGGTCTGAATGACGCAGTTTTCAACAAATTTTTAAAAAGTAAAGAAA
TTAAATGCGTTGCTTGCCGTGCAAACTATGGAAGACAGAAAGCTTACGTTGATGTTCGGG
CTGAAGATAAAGATGCGGCTCTTCAGCTCCACCAAGTGGAATGGAAGGGACAAGAGATTC
AAGTAACAGAAGCTCAATCTAAAGCACAGGATAGAAAAGGTGGTGATTTTGCATCAAACC
GAAACGATAAAGATGAAAGAACATTGTTTGTGAAAAATCTTCCGTACAGTGCGGATGAGA
ATGCGATCGCCGAGCTTTTTGATGGAGTTAAAGAAGTTCGTTTACTAACTGACAGGGAAA
GTGGAAGACCTAAAGGAATGGCATTCATTGAGTTTGATTCAACTGCTGAAAAAGAAACGG
CTTTTGGTTTGAAAGATGAGCTGGAGATGGACGGAAGATCTTTGTATCTTGATAATGTTA
CTGGTGGTGGTGGTGGTGGAAGAGGTCGTGGTAATCGAGGTGGAAGAGGAGGGTTTGGCC
GTGGAGGTGGTGGATTTGGTGCTGGGAGAGGCAGAGGGGGAAGAGGTCCATCTGCACCGA
GCAAAACACTTTTTGTGAAGGGAATCACAGAGGACATGACACGAGATACTTTGTATGAAA
CCTTCTCTGGTGCAACAGACATTCGTATTCCCCAGGATCGAGACACTGGAAAAAATAAAT
TCTTTGCTTATGTTGAATATCAATCTGAGAGCTCGGCAACAGAAGTTTATAAAAGTTCGA
AAGGAGGTATGCATGTTGAT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[224-292] 7.3E-20 - T[293-345] 7.3E-20 - T[346-365] 7.3E-20 - T[404-475] 4.6E-14 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[289-404] 1.24E-23 - T[376-469] 8.6E-16 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[297-372] 15.067 - T[412-477] 12.015 |
| SMART |
RRM_dom (IPR000504) - T[298-368] 1.7E-14 - T[413-477] 1.0E-9 |
| Pfam |
RRM_dom (IPR000504) - T[299-365] 2.5E-10 - T[414-468] 9.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NUCL_HUMAN | 30.105 % | 82.8 | 8.82E-17 |