- Transcript 'KH2012:KH.L38.16.v1....' >
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- Transcript 'KH2012:KH.S390.2.v1....'
Transcript Model
Transcript Id
KH2012:KH.S390.2.v1.A.nonSL9-1
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
KhS390 [60,153 / 64,973]
Amino acid sequence
Length: 428
>KH.S390.2.v1.A.nonSL9-1
FSVTLISNMYIWASNPAQCWPYAHPMPHNRNLPPPSPSTASNTSSSNHSNSTASPPSGTG
SPHNMQIVQMIPNQTIIPQGLGPMNNGCNHVNGNNNCDQLSKTNLYIRGLSAATNDEDLH
NLCKQYGKIVSTKAIIDPATNLCKGYGFVDFDRYDSASLAVEQLKHRGIQAQMAKQQEQD
PTNLYISNLPRNINEQELENMLSPYGQVISTRILRDNNSVSKGVGFARMESKEKCEQIIC
KFNGKYLHNIAGGEQPTEPLLCKFADGGPKKNKQHQKFMNGGRQWRDGDVQFAYDVPSLH
NGLPANRLMVQQIPNPAYQQMPGAPMWVQPPSYVVQPHMPPGSVISQVDPALHHVHPGVL
PQMGQLTNQMNQLQLGHPAATMPYVPSTVGPPFIPHYNQALVPPRVNDATPTEAEQPEVD
EVSSEQQL
Nucleotide sequence
Length: 2,271
>KH2012:KH.S390.2.v1.A.nonSL9-1
AGTAACGTAATACCGACGGCGCGTGATAAGGGCGTGACGCATCTGCTACGCTGTGACGTA
AGATAAAATGTTCACGAGCGCAGTCGTTTCATTGTTGGAGGTGTTAGAATAATTATTGTT
AGTTTGTTACAACTGTTCGATTGTCTTAAACAGAAGACTGTGGGGCTCACTAGCTAGGCA
GAGTGAATAGAAGTGATATTTATCATCGAGTGGTTTCTATTTGTCTAGAGTTGGTCTGTA
AGCAAACATTCGTTGGAAGAAGGGAATGTCATTCAAATATGTGGCTGCTAGCGTTCCGGA
TATATAACCAACTTGTATTTGCAGTGTAGCCGTATATATCCATATAGTCCCTTATATATA
TGTATAGTATAACCAGTGGTGAATATAGTTGTTGTATAGTTTAGTGTAACACTAATATCT
AACATGTACATTTGGGCGAGTAATCCCGCGCAATGCTGGCCATACGCACACCCGATGCCG
CACAACCGAAACCTCCCGCCCCCAAGCCCTTCTACTGCAAGTAATACGTCATCATCCAAC
CATTCCAACAGTACAGCGAGCCCACCAAGCGGGACAGGGAGTCCACATAATATGCAGATC
GTACAAATGATTCCAAACCAAACCATTATACCACAGGGTTTGGGGCCGATGAACAACGGT
TGCAACCACGTGAACGGCAACAATAATTGCGACCAACTAAGCAAAACTAATCTTTACATC
CGTGGTTTATCAGCCGCAACCAACGATGAAGATTTACATAATCTTTGCAAACAGTACGGC
AAGATTGTTTCAACCAAAGCCATAATTGATCCAGCCACTAATTTATGCAAAGGTTATGGC
TTTGTTGATTTTGATCGTTACGATTCAGCGAGTTTGGCCGTGGAACAACTGAAGCATCGA
GGCATCCAAGCACAGATGGCCAAGCAACAAGAGCAAGACCCCACAAACCTATATATCTCC
AACCTTCCACGAAATATTAACGAACAAGAACTTGAAAATATGTTGTCACCTTACGGACAA
GTTATTTCAACCAGGATATTACGCGACAACAACAGCGTTAGTAAAGGCGTTGGATTCGCA
AGGATGGAATCCAAGGAAAAATGCGAACAAATTATTTGCAAATTTAACGGGAAATATCTT
CATAATATTGCTGGTGGTGAACAACCAACCGAACCACTTCTTTGTAAATTTGCGGACGGA
GGTCCAAAGAAGAACAAACAACACCAGAAGTTCATGAACGGAGGACGACAGTGGAGAGAC
GGGGACGTTCAGTTCGCTTACGACGTTCCCTCGTTGCACAACGGATTACCAGCCAACAGA
TTAATGGTTCAACAAATCCCCAACCCAGCTTACCAGCAGATGCCGGGCGCACCGATGTGG
GTTCAACCGCCTTCGTACGTTGTACAACCACACATGCCACCGGGCAGCGTTATATCGCAA
GTTGACCCAGCGCTCCACCATGTACATCCTGGTGTTCTACCACAGATGGGACAACTAACC
AACCAAATGAACCAACTTCAACTCGGTCACCCCGCTGCTACAATGCCGTACGTTCCGAGC
ACGGTTGGTCCACCTTTCATACCTCACTACAACCAAGCTCTTGTACCGCCACGAGTGAAC
GATGCCACGCCCACTGAAGCGGAACAACCAGAAGTTGATGAAGTTTCCTCCGAACAACAA
TTGTGATTATGATGTCACAACTTTCAATGACTTTGAAACAATTTACTTTAACAAACATTG
TTTATGATGTCACAAATCGCAGTGACAAACATTTTGCGAAATTTTATCAAAGATTTTGCA
ACGAACGTGCAATTTTGATTGGTCAAGCGAGCGAGCACATCACTGTGTAGATCGTAACAA
AACATAAAATCTCTTGCCCAACTCACACAGGGTCCAATGCACTACAGTTTCAATCCATAT
TTCACATGGATGTTCTTACTAGTTGCACAAGAGCTTTTAAAGATAGATTTTATTATTTAA
GATTATTTTCTTATCGAATTTATTTCTTTTTGAAATTGGATTGAAATATTTTATGATCAG
AGTTATCGAGCCGTCCTTGAGTATTTTTATCAATTTTTTGCTGATTTTTATTGAGTTTCT
GAAAATACGTCGCAAAAATAGATGTTTATAGCGCCCCATGTGGCGAGTTACACAGATTGT
CTTCCATGTTTGTATATATATGATTTCTCTGTGACTAAATATTGGATATCTATGTTGAGT
GTCATCGAAGCAATTTACCCCAACATTGCACACGCCCCTCTCACGCCCCCA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[70-169] 4.57E-20 - T[172-282] 3.09E-20 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[99-180] 2.5E-20 - T[181-265] 1.5E-19 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[103-118] 5.4E-8 - T[187-202] 5.4E-8 - T[202-214] 5.4E-8 - T[248-265] 5.4E-8 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[103-176] 14.112 - T[182-267] 14.658 |
| SMART |
RRM_dom (IPR000504) - T[104-172] 3.7E-14 - T[183-257] 6.6E-11 |
| Pfam |
RRM_dom (IPR000504) - T[105-168] 3.8E-13 - T[184-249] 3.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 50.909 % | 291 | 4.83E-95 |
| RBMS1_HUMAN | 51.084 % | 293 | 7.73E-96 |
| RBMS3_HUMAN | 54.515 % | 285 | 3.37E-92 |