- Transcript 'KH2012:KH.L38.16.v1....' >
- Transcript 'KH2012:KH.L116.66.v1...' >
- Transcript 'KH2012:KH.S390.2.v1....' >
- Transcript 'KH2012:KH.S390.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.S390.2.v2.A.SL3-1
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
KhS390 [58,520 / 64,973]
Amino acid sequence
Length: 449
>KH.S390.2.v2.A.SL3-1
EIRQQIIAHCFVNKGMAALAVRPEGSVPGAYYYTSPHLYNKPYAHPMPHNRNLPPPSPST
ASNTSSSNHSNSTASPPSGTGSPHNMQIVQMIPNQTIIPQGLGPMNNGCNHVNGNNNCDQ
LSKTNLYIRGLSAATNDEDLHNLCKQYGKIVSTKAIIDPATNLCKGYGFVDFDRYDSASL
AVEQLKHRGIQAQMAKQQEQDPTNLYISNLPRNINEQELENMLSPYGQVISTRILRDNNS
VSKGVGFARMESKEKCEQIICKFNGKYLHNIAGGEQPTEPLLCKFADGGPKKNKQHQKFM
NGGRQWRDGDVQFAYDVPSLHNGLPANRLMVQQIPNPAYQQMPGAPMWVQPPSYVVQPHM
PPGSVISQVDPALHHVHPGVLPQMGQLTNQMNQLQLGHPAATMPYVPSTVGPPFIPHYNQ
ALVPPRVNDATPTEAEQPEVDEVSSEQQL
Nucleotide sequence
Length: 2,046
>KH2012:KH.S390.2.v2.A.SL3-1
TCTGGAGGCCTTTGTAGGAAATATTGTTGGCAGATTGTGACAAATAAAGGGCATTGTTAT
CCATTGTGACGTGTGTGACATCTTAGTGTGAAGCAACAATAACCATTCTAAGAAATTCGG
CAACAAATAATTGCTCATTGTTTCGTAAATAAAGGCATGGCTGCATTAGCTGTTCGACCC
GAAGGCTCGGTACCCGGTGCATATTATTATACGTCACCCCATTTGTATAACAAGCCATAC
GCACACCCGATGCCGCACAACCGAAACCTCCCGCCCCCAAGCCCTTCTACTGCAAGTAAT
ACGTCATCATCCAACCATTCCAACAGTACAGCGAGCCCACCAAGCGGGACAGGGAGTCCA
CATAATATGCAGATCGTACAAATGATTCCAAACCAAACCATTATACCACAGGGTTTGGGG
CCGATGAACAACGGTTGCAACCACGTGAACGGCAACAATAATTGCGACCAACTAAGCAAA
ACTAATCTTTACATCCGTGGTTTATCAGCCGCAACCAACGATGAAGATTTACATAATCTT
TGCAAACAGTACGGCAAGATTGTTTCAACCAAAGCCATAATTGATCCAGCCACTAATTTA
TGCAAAGGTTATGGCTTTGTTGATTTTGATCGTTACGATTCAGCGAGTTTGGCCGTGGAA
CAACTGAAGCATCGAGGCATCCAAGCACAGATGGCCAAGCAACAAGAGCAAGACCCCACA
AACCTATATATCTCCAACCTTCCACGAAATATTAACGAACAAGAACTTGAAAATATGTTG
TCACCTTACGGACAAGTTATTTCAACCAGGATATTACGCGACAACAACAGCGTTAGTAAA
GGCGTTGGATTCGCAAGGATGGAATCCAAGGAAAAATGCGAACAAATTATTTGCAAATTT
AACGGGAAATATCTTCATAATATTGCTGGTGGTGAACAACCAACCGAACCACTTCTTTGT
AAATTTGCGGACGGAGGTCCAAAGAAGAACAAACAACACCAGAAGTTCATGAACGGAGGA
CGACAGTGGAGAGACGGGGACGTTCAGTTCGCTTACGACGTTCCCTCGTTGCACAACGGA
TTACCAGCCAACAGATTAATGGTTCAACAAATCCCCAACCCAGCTTACCAGCAGATGCCG
GGCGCACCGATGTGGGTTCAACCGCCTTCGTACGTTGTACAACCACACATGCCACCGGGC
AGCGTTATATCGCAAGTTGACCCAGCGCTCCACCATGTACATCCTGGTGTTCTACCACAG
ATGGGACAACTAACCAACCAAATGAACCAACTTCAACTCGGTCACCCCGCTGCTACAATG
CCGTACGTTCCGAGCACGGTTGGTCCACCTTTCATACCTCACTACAACCAAGCTCTTGTA
CCGCCACGAGTGAACGATGCCACGCCCACTGAAGCGGAACAACCAGAAGTTGATGAAGTT
TCCTCCGAACAACAATTGTGATTATGATGTCACAACTTTCAATGACTTTGAAACAATTTA
CTTTAACAAACATTGTTTATGATGTCACAAATCGCAGTGACAAACATTTTGCGAAATTTT
ATCAAAGATTTTGCAACGAACGTGCAATTTTGATTGGTCAAGCGAGCGAGCACATCACTG
TGTAGATCGTAACAAAACATAAAATCTCTTGCCCAACTCACACAGGGTCCAATGCACTAC
AGTTTCAATCCATATTTCACATGGATGTTCTTACTAGTTGCACAAGAGCTTTTAAAGATA
GATTTTATTATTTAAGATTATTTTCTTATCGAATTTATTTCTTTTTGAAATTGGATTGAA
ATATTTTATGATCAGAGTTATCGAGCCGTCCTTGAGTATTTTTATCAATTTTTTGCTGAT
TTTTATTGAGTTTCTGAAAATACGTCGCAAAAATAGATGTTTATAGCGCCCCATGTGGCG
AGTTACACAGATTGTCTTCCATGTTTGTATATATATGATTTCTCTGTGACTAAATATTGG
ATATCTATGTTGAGTGTCATCGAAGCAATTTACCCCAACATTGCACACGCCCCTCTCACG
CCCCCA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[91-188] 5.51E-20 - T[193-303] 3.36E-20 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[120-201] 2.7E-20 - T[202-286] 1.7E-19 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[124-197] 14.112 - T[203-288] 14.658 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[124-139] 6.4E-8 - T[208-223] 6.4E-8 - T[223-235] 6.4E-8 - T[269-286] 6.4E-8 |
| SMART |
RRM_dom (IPR000504) - T[125-193] 3.7E-14 - T[204-278] 6.6E-11 |
| Pfam |
RRM_dom (IPR000504) - T[126-189] 4.1E-13 - T[205-270] 3.5E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 50.909 % | 291 | 6.06E-95 |
| RBMS1_HUMAN | 51.084 % | 293 | 1.02E-95 |
| RBMS3_HUMAN | 54.515 % | 285 | 3.81E-92 |