- Transcript 'KH2012:KH.C8.163.v4....' >
- Transcript 'KH2012:KH.S390.2.v3....'
Transcript Model
Transcript Id
KH2012:KH.S390.2.v3.A.SL4-1
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
KhS390 [56,167 / 64,973]
Amino acid sequence
Length: 470
>KH.S390.2.v3.A.SL4-1
INKLLSIFNLARHKLLTKELVHEMPGIHQSDSVQHSYHMSPGTRNQYHPNFNMSAAVTHR
INPYAHPMPHNRNLPPPSPSTASNTSSSNHSNSTASPPSGTGSPHNMQIVQMIPNQTIIP
QGLGPMNNGCNHVNGNNNCDQLSKTNLYIRGLSAATNDEDLHNLCKQYGKIVSTKAIIDP
ATNLCKGYGFVDFDRYDSASLAVEQLKHRGIQAQMAKQQEQDPTNLYISNLPRNINEQEL
ENMLSPYGQVISTRILRDNNSVSKGVGFARMESKEKCEQIICKFNGKYLHNIAGGEQPTE
PLLCKFADGGPKKNKQHQKFMNGGRQWRDGDVQFAYDVPSLHNGLPANRLMVQQIPNPAY
QQMPGAPMWVQPPSYVVQPHMPPGSVISQVDPALHHVHPGVLPQMGQLTNQMNQLQLGHP
AATMPYVPSTVGPPFIPHYNQALVPPRVNDATPTEAEQPEVDEVSSEQQL
Nucleotide sequence
Length: 2,021
>KH2012:KH.S390.2.v3.A.SL4-1
GGTATAGTGGGTTAAATTTATAAATCAACAAATTGTTATCAATATTTAATTTGGCAAGAC
ACAAGTTATTAACAAAAGAATTGGTACATGAGATGCCAGGAATCCACCAAAGTGACAGCG
TACAACATTCCTACCACATGTCCCCTGGAACAAGAAACCAATATCATCCAAACTTTAACA
TGTCGGCTGCAGTAACCCATCGAATTAACCCATACGCACACCCGATGCCGCACAACCGAA
ACCTCCCGCCCCCAAGCCCTTCTACTGCAAGTAATACGTCATCATCCAACCATTCCAACA
GTACAGCGAGCCCACCAAGCGGGACAGGGAGTCCACATAATATGCAGATCGTACAAATGA
TTCCAAACCAAACCATTATACCACAGGGTTTGGGGCCGATGAACAACGGTTGCAACCACG
TGAACGGCAACAATAATTGCGACCAACTAAGCAAAACTAATCTTTACATCCGTGGTTTAT
CAGCCGCAACCAACGATGAAGATTTACATAATCTTTGCAAACAGTACGGCAAGATTGTTT
CAACCAAAGCCATAATTGATCCAGCCACTAATTTATGCAAAGGTTATGGCTTTGTTGATT
TTGATCGTTACGATTCAGCGAGTTTGGCCGTGGAACAACTGAAGCATCGAGGCATCCAAG
CACAGATGGCCAAGCAACAAGAGCAAGACCCCACAAACCTATATATCTCCAACCTTCCAC
GAAATATTAACGAACAAGAACTTGAAAATATGTTGTCACCTTACGGACAAGTTATTTCAA
CCAGGATATTACGCGACAACAACAGCGTTAGTAAAGGCGTTGGATTCGCAAGGATGGAAT
CCAAGGAAAAATGCGAACAAATTATTTGCAAATTTAACGGGAAATATCTTCATAATATTG
CTGGTGGTGAACAACCAACCGAACCACTTCTTTGTAAATTTGCGGACGGAGGTCCAAAGA
AGAACAAACAACACCAGAAGTTCATGAACGGAGGACGACAGTGGAGAGACGGGGACGTTC
AGTTCGCTTACGACGTTCCCTCGTTGCACAACGGATTACCAGCCAACAGATTAATGGTTC
AACAAATCCCCAACCCAGCTTACCAGCAGATGCCGGGCGCACCGATGTGGGTTCAACCGC
CTTCGTACGTTGTACAACCACACATGCCACCGGGCAGCGTTATATCGCAAGTTGACCCAG
CGCTCCACCATGTACATCCTGGTGTTCTACCACAGATGGGACAACTAACCAACCAAATGA
ACCAACTTCAACTCGGTCACCCCGCTGCTACAATGCCGTACGTTCCGAGCACGGTTGGTC
CACCTTTCATACCTCACTACAACCAAGCTCTTGTACCGCCACGAGTGAACGATGCCACGC
CCACTGAAGCGGAACAACCAGAAGTTGATGAAGTTTCCTCCGAACAACAATTGTGATTAT
GATGTCACAACTTTCAATGACTTTGAAACAATTTACTTTAACAAACATTGTTTATGATGT
CACAAATCGCAGTGACAAACATTTTGCGAAATTTTATCAAAGATTTTGCAACGAACGTGC
AATTTTGATTGGTCAAGCGAGCGAGCACATCACTGTGTAGATCGTAACAAAACATAAAAT
CTCTTGCCCAACTCACACAGGGTCCAATGCACTACAGTTTCAATCCATATTTCACATGGA
TGTTCTTACTAGTTGCACAAGAGCTTTTAAAGATAGATTTTATTATTTAAGATTATTTTC
TTATCGAATTTATTTCTTTTTGAAATTGGATTGAAATATTTTATGATCAGAGTTATCGAG
CCGTCCTTGAGTATTTTTATCAATTTTTTGCTGATTTTTATTGAGTTTCTGAAAATACGT
CGCAAAAATAGATGTTTATAGCGCCCCATGTGGCGAGTTACACAGATTGTCTTCCATGTT
TGTATATATATGATTTCTCTGTGACTAAATATTGGATATCTATGTTGAGTGTCATCGAAG
CAATTTACCCCAACATTGCACACGCCCCTCTCACGCCCCCA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[141-222] 2.9E-20 - T[223-307] 1.8E-19 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[145-291] 7.43E-34 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[145-160] 7.5E-8 - T[229-244] 7.5E-8 - T[244-256] 7.5E-8 - T[290-307] 7.5E-8 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[145-218] 14.112 - T[224-309] 14.658 |
| SMART |
RRM_dom (IPR000504) - T[146-214] 3.7E-14 - T[225-299] 6.6E-11 |
| Pfam |
RRM_dom (IPR000504) - T[147-210] 4.4E-13 - T[226-291] 3.7E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 50.909 % | 292 | 5.37E-95 |
| RBMS1_HUMAN | 51.084 % | 295 | 6.79E-96 |
| RBMS3_HUMAN | 54.515 % | 286 | 3.87E-92 |