- Transcript 'KH2012:KH.C4.335.v2....' >
- Transcript 'KH2012:KH.C8.163.v2....' >
- Transcript 'KH2012:KH.S1479.1.v4...' >
- Transcript 'KH2012:KH.S390.2.v4....'
Transcript Model
Transcript Id
KH2012:KH.S390.2.v4.A.SL5-1
Possible name(s)
RBMS1; RBMS2; RBMS3
Gene model
Location
KhS390 [61,263 / 64,973]
Amino acid sequence
Length: 316
>KH.S390.2.v4.A.SL5-1
ATNDEDLHNLCKQYGKIVSTKAIIDPATNLCKGYGFVDFDRYDSASLAVEQLKHRGIQAQ
MAKQQEQDPTNLYISNLPRNINEQELENMLSPYGQVISTRILRDNNSVSKGVGFARMESK
EKCEQIICKFNGKYLHNIAGGEQPTEPLLCKFADGGPKKNKQHQKFMNGGRQWRDGDVQF
AYDVPSLHNGLPANRLMVQQIPNPAYQQMPGAPMWVQPPSYVVQPHMPPGSVISQVDPAL
HHVHPGVLPQMGQLTNQMNQLQLGHPAATMPYVPSTVGPPFIPHYNQALVPPRVNDATPT
EAEQPEVDEVSSEQQL
Nucleotide sequence
Length: 1,538
>KH2012:KH.S390.2.v4.A.SL5-1
CCGCAACCAACGATGAAGATTTACATAATCTTTGCAAACAGTACGGCAAGATTGTTTCAA
CCAAAGCCATAATTGATCCAGCCACTAATTTATGCAAAGGTTATGGCTTTGTTGATTTTG
ATCGTTACGATTCAGCGAGTTTGGCCGTGGAACAACTGAAGCATCGAGGCATCCAAGCAC
AGATGGCCAAGCAACAAGAGCAAGACCCCACAAACCTATATATCTCCAACCTTCCACGAA
ATATTAACGAACAAGAACTTGAAAATATGTTGTCACCTTACGGACAAGTTATTTCAACCA
GGATATTACGCGACAACAACAGCGTTAGTAAAGGCGTTGGATTCGCAAGGATGGAATCCA
AGGAAAAATGCGAACAAATTATTTGCAAATTTAACGGGAAATATCTTCATAATATTGCTG
GTGGTGAACAACCAACCGAACCACTTCTTTGTAAATTTGCGGACGGAGGTCCAAAGAAGA
ACAAACAACACCAGAAGTTCATGAACGGAGGACGACAGTGGAGAGACGGGGACGTTCAGT
TCGCTTACGACGTTCCCTCGTTGCACAACGGATTACCAGCCAACAGATTAATGGTTCAAC
AAATCCCCAACCCAGCTTACCAGCAGATGCCGGGCGCACCGATGTGGGTTCAACCGCCTT
CGTACGTTGTACAACCACACATGCCACCGGGCAGCGTTATATCGCAAGTTGACCCAGCGC
TCCACCATGTACATCCTGGTGTTCTACCACAGATGGGACAACTAACCAACCAAATGAACC
AACTTCAACTCGGTCACCCCGCTGCTACAATGCCGTACGTTCCGAGCACGGTTGGTCCAC
CTTTCATACCTCACTACAACCAAGCTCTTGTACCGCCACGAGTGAACGATGCCACGCCCA
CTGAAGCGGAACAACCAGAAGTTGATGAAGTTTCCTCCGAACAACAATTGTGATTATGAT
GTCACAACTTTCAATGACTTTGAAACAATTTACTTTAACAAACATTGTTTATGATGTCAC
AAATCGCAGTGACAAACATTTTGCGAAATTTTATCAAAGATTTTGCAACGAACGTGCAAT
TTTGATTGGTCAAGCGAGCGAGCACATCACTGTGTAGATCGTAACAAAACATAAAATCTC
TTGCCCAACTCACACAGGGTCCAATGCACTACAGTTTCAATCCATATTTCACATGGATGT
TCTTACTAGTTGCACAAGAGCTTTTAAAGATAGATTTTATTATTTAAGATTATTTTCTTA
TCGAATTTATTTCTTTTTGAAATTGGATTGAAATATTTTATGATCAGAGTTATCGAGCCG
TCCTTGAGTATTTTTATCAATTTTTTGCTGATTTTTATTGAGTTTCTGAAAATACGTCGC
AAAAATAGATGTTTATAGCGCCCCATGTGGCGAGTTACACAGATTGTCTTCCATGTTTGT
ATATATATGATTTCTCTGTGACTAAATATTGGATATCTATGTTGAGTGTCATCGAAGCAA
TTTACCCCAACATTGCACACGCCCCTCTCACGCCCCCA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-69] 1.3E-15 - T[70-153] 9.1E-20 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[1-64] 11.571 - T[70-155] 14.658 |
| Pfam |
RRM_dom (IPR000504) - T[2-56] 1.3E-10 - T[72-137] 2.0E-14 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[2-55] 5.51E-14 - T[59-170] 1.75E-20 |
| SMART |
RRM_dom (IPR000504) - T[2-60] 0.035 - T[71-145] 6.6E-11 |
| PRINTS |
Hud_Sxl_RNA (IPR002343) - T[75-90] 5.6E-7 - T[90-102] 5.6E-7 - T[136-153] 5.6E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBMS2_HUMAN | 49.206 % | 266 | 7.44E-87 |
| RBMS1_HUMAN | 49.511 % | 270 | 2.63E-88 |
| RBMS3_HUMAN | 53.169 % | 263 | 2.89E-85 |