- Transcript 'KH2012:KH.S390.9.v1....'
Transcript Model
Transcript Id
KH2012:KH.S390.9.v1.B.SL1-1
Possible name(s)
EXOSC7; EXOSC8; EXOSC9
Gene model
Location
KhS390 [33,129 / 38,808]
Amino acid sequence
Length: 402
>KH.S390.9.v1.B.SL1-1
IGYIHTLILQSPLVYCKMPMRDVAFSKREHEFVVEALTKKIRIDGRGMLEYRGITIHFSL
DHGCCVVNMGGTKVMAQVAAELCRPRESRQSEGSLGVQVEMSMMAAPHLDPAKPGDSGAE
LQQMLERSIVMSQAVDLEELCVRVGEKSWNIQIFVHVLSHDGNLLDCATIASMTSLKHFK
RPDVSVVGQEVTIHKFEDKHPIPLTLHHVPFCVSFAFFQGGGLMVVDPTLNEEKVMDGKL
MVAVNKHKEVCCLQMNGQLQLSKEQILNCTNIASTKAQTFYDIMETSLENDQKQKAKGNT
RSTMMSSRKQETKKPQTIKLLPINNKPNNGRCDIIDNKSHDEPPPTWLTQHDSSTASIGE
GLVNTWEGGDDVIKALRSPPPDDITPDDVMSSSDEEVTLMLD
Nucleotide sequence
Length: 2,171
>KH2012:KH.S390.9.v1.B.SL1-1
CGACTGAACATAACTGTTTTTTAATCTCTCTGTGTTTCTGTCTCTGGCTCTCTCTCTCTT
TGGCTCTCTATCTGGCTGACGCGGCTGCTAGTTTGGCTATTGTTGGAACCTGCCTATCGT
GTATGATTCGCGTTATCGTCAATACATTTGTACATATTCATCAAGAGGAGAGCATTAATT
AAGTGTATGAAACAGAACATCTGTGTTATAACGACTGTCGTTGCCCCGCCATACAAGGAT
AAATAGGTTACATACATACATTAATATTACAGTCGCCGTTAGTTTATTGTAAGATGCCGA
TGCGAGATGTTGCGTTTTCGAAACGCGAGCACGAGTTTGTTGTTGAAGCTTTAACAAAGA
AGATAAGGATTGACGGTCGTGGAATGTTGGAGTACCGAGGTATTACCATCCACTTCTCCC
TTGACCATGGGTGTTGTGTGGTGAACATGGGAGGAACCAAGGTTATGGCGCAAGTGGCTG
CTGAGCTGTGTAGACCGAGGGAAAGTCGTCAAAGTGAGGGAAGTCTCGGGGTTCAGGTTG
AGATGTCAATGATGGCCGCCCCTCATTTGGATCCTGCTAAACCAGGTGACAGTGGAGCTG
AACTTCAACAAATGTTGGAACGATCGATTGTGATGTCACAAGCTGTTGATTTGGAGGAAC
TTTGCGTCAGGGTCGGCGAGAAATCGTGGAATATTCAAATATTCGTTCATGTTTTGTCAC
ATGACGGGAACTTACTTGATTGCGCAACAATTGCCTCTATGACATCACTAAAGCATTTTA
AACGACCAGATGTTTCAGTTGTTGGTCAGGAAGTTACAATTCACAAGTTTGAAGATAAAC
ACCCGATCCCACTCACTCTTCATCACGTCCCGTTCTGTGTTTCATTCGCATTCTTTCAAG
GCGGTGGTTTGATGGTGGTTGATCCGACATTGAACGAGGAAAAAGTTATGGACGGGAAGT
TGATGGTGGCCGTGAATAAGCATAAAGAAGTTTGTTGTTTACAAATGAACGGACAACTTC
AGCTGAGTAAAGAACAGATATTGAACTGCACGAACATCGCTTCCACGAAGGCGCAAACCT
TCTATGACATCATGGAGACAAGTTTAGAAAACGATCAGAAACAAAAAGCGAAGGGGAATA
CCCGGTCCACCATGATGTCATCAAGAAAACAAGAAACAAAGAAACCTCAAACAATTAAAC
TTCTTCCGATAAACAATAAACCAAACAATGGCCGTTGTGACATCATAGACAATAAGTCAC
ATGACGAACCTCCTCCCACTTGGTTGACTCAACACGACAGCTCGACAGCGAGCATAGGTG
AGGGGTTGGTGAACACTTGGGAGGGGGGTGATGATGTCATCAAGGCCCTCCGTTCCCCCC
CACCTGATGACATCACACCCGATGATGTCATGAGTTCTAGTGATGAAGAAGTTACGCTCA
TGTTGGATTAACCTCGGGTGTAACTTACACACTTGTATACAAAGCTTGGTGGTTTGGTAA
CCATGTGCCATGTAAGTGTCGTATAAACTGATGTCAAAGCATTGCATGCCGTGCTTGTGC
CCATGTTGGCACCCGTTGTACGCAAATGTTGGTTGGCCAGCTATGCGCGATATCAACCAG
TCATAGCATTGTTTGTGATGTCATACAACACATAGTTGTTGTTGGGACATCCCCCAACAC
CCCATATATAATGTTTCTTTATAAAATCCGCACTGCCAACCTCCCTATGATTAAAATTAT
GCATTGAATATGAACCAATTTTGTTTACAACGTGTGTGCTGGTGTATGACCCATGATATA
CATCACATCTGTAAGCAATAATATGTGTTGTCACAATAACTCTATGTGCCCGGTCAACTG
GTTAAACCAAGTGGTTTCTTTTAGGGTTGCCTAAACCAGTTATATTCAGTTATACAGAAA
AATAAAATCCATAAAAATAATCACTCACACAGTTGTGTACATGGTAAATTGATAACCTGT
AAACGGGCACGAGGTGTATGAAACAGAACACCCGTGTTATAACGACTGTCGTTGCCCCAC
CATGCGAGGATAAATAAGTTACATACATGGTAACTTGTAAGTGGGCACGAGGTGTATGAA
ACAGAACAACCGTGTTATAACGACTGTTATTGCCCCGCCATGCGAGGTTTAATAAATTAC
ATTCATTCATA
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[20-187] 2.02E-48 - T[220-234] 2.02E-48 |
| Gene3D |
PNPase/RNase_PH_dom_sf (IPR027408) - T[23-319] 1.2E-91 |
| CDD |
Rrp45 (IPR033100) - T[26-283] 1.51118E-143 |
| Pfam |
ExoRNase_PH_dom1 (IPR001247) - T[60-182] 7.4E-18 |
| SUPERFAMILY |
ExoRNase_PH_dom2_sf (IPR036345) - T[204-306] 6.45E-31 |
| Pfam |
ExoRNase_PH_dom2 (IPR015847) - T[208-274] 2.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOS7_HUMAN | 30.196 % | 100 | 4.58E-24 |
| EXOS8_HUMAN | 27.132 % | 111 | 4.86E-28 |
| EXOS9_HUMAN | 38.424 % | 273 | 3.58E-88 |