- Transcript 'KH2012:KH.S390.9.v2....'
Transcript Model
Transcript Id
KH2012:KH.S390.9.v2.B.SL2-1
Possible name(s)
EXOSC7; EXOSC8; EXOSC9
Gene model
Location
KhS390 [35,357 / 38,808]
Amino acid sequence
Length: 392
>KH.S390.9.v2.B.SL2-1
SPLVYCKMPMRDVAFSKREHEFVVEALTKKIRIDGRGMLEYRGITIHFSLDHGCCVVNMG
GTKVMAQVAAELCRPRESRQSEGSLGVQVEMSMMAAPHLDPAKPGDSGAELQQMLERSIV
MSQAVDLEELCVRVGEKSWNIQIFVHVLSHDGNLLDCATIASMTSLKHFKRPDVSVVGQE
VTIHKFEDKHPIPLTLHHVPFCVSFAFFQGGGLMVVDPTLNEEKVMDGKLMVAVNKHKEV
CCLQMNGQLQLSKEQILNCTNIASTKAQTFYDIMETSLENDQKQKAKGNTRSTMMSSRKQ
ETKKPQTIKLLPINNKPNNGRCDIIDNKSHDEPPPTWLTQHDSSTASIGEGLVNTWEGGD
DVIKALRSPPPDDITPDDVMSSSDEEVTLMLD
Nucleotide sequence
Length: 1,899
>KH2012:KH.S390.9.v2.B.SL2-1
TCGCCGTTAGTTTATTGTAAGATGCCGATGCGAGATGTTGCGTTTTCGAAACGCGAGCAC
GAGTTTGTTGTTGAAGCTTTAACAAAGAAGATAAGGATTGACGGTCGTGGAATGTTGGAG
TACCGAGGTATTACCATCCACTTCTCCCTTGACCATGGGTGTTGTGTGGTGAACATGGGA
GGAACCAAGGTTATGGCGCAAGTGGCTGCTGAGCTGTGTAGACCGAGGGAAAGTCGTCAA
AGTGAGGGAAGTCTCGGGGTTCAGGTTGAGATGTCAATGATGGCCGCCCCTCATTTGGAT
CCTGCTAAACCAGGTGACAGTGGAGCTGAACTTCAACAAATGTTGGAACGATCGATTGTG
ATGTCACAAGCTGTTGATTTGGAGGAACTTTGCGTCAGGGTCGGCGAGAAATCGTGGAAT
ATTCAAATATTCGTTCATGTTTTGTCACATGACGGGAACTTACTTGATTGCGCAACAATT
GCCTCTATGACATCACTAAAGCATTTTAAACGACCAGATGTTTCAGTTGTTGGTCAGGAA
GTTACAATTCACAAGTTTGAAGATAAACACCCGATCCCACTCACTCTTCATCACGTCCCG
TTCTGTGTTTCATTCGCATTCTTTCAAGGCGGTGGTTTGATGGTGGTTGATCCGACATTG
AACGAGGAAAAAGTTATGGACGGGAAGTTGATGGTGGCCGTGAATAAGCATAAAGAAGTT
TGTTGTTTACAAATGAACGGACAACTTCAGCTGAGTAAAGAACAGATATTGAACTGCACG
AACATCGCTTCCACGAAGGCGCAAACCTTCTATGACATCATGGAGACAAGTTTAGAAAAC
GATCAGAAACAAAAAGCGAAGGGGAATACCCGGTCCACCATGATGTCATCAAGAAAACAA
GAAACAAAGAAACCTCAAACAATTAAACTTCTTCCGATAAACAATAAACCAAACAATGGC
CGTTGTGACATCATAGACAATAAGTCACATGACGAACCTCCTCCCACTTGGTTGACTCAA
CACGACAGCTCGACAGCGAGCATAGGTGAGGGGTTGGTGAACACTTGGGAGGGGGGTGAT
GATGTCATCAAGGCCCTCCGTTCCCCCCCACCTGATGACATCACACCCGATGATGTCATG
AGTTCTAGTGATGAAGAAGTTACGCTCATGTTGGATTAACCTCGGGTGTAACTTACACAC
TTGTATACAAAGCTTGGTGGTTTGGTAACCATGTGCCATGTAAGTGTCGTATAAACTGAT
GTCAAAGCATTGCATGCCGTGCTTGTGCCCATGTTGGCACCCGTTGTACGCAAATGTTGG
TTGGCCAGCTATGCGCGATATCAACCAGTCATAGCATTGTTTGTGATGTCATACAACACA
TAGTTGTTGTTGGGACATCCCCCAACACCCCATATATAATGTTTCTTTATAAAATCCGCA
CTGCCAACCTCCCTATGATTAAAATTATGCATTGAATATGAACCAATTTTGTTTACAACG
TGTGTGCTGGTGTATGACCCATGATATACATCACATCTGTAAGCAATAATATGTGTTGTC
ACAATAACTCTATGTGCCCGGTCAACTGGTTAAACCAAGTGGTTTCTTTTAGGGTTGCCT
AAACCAGTTATATTCAGTTATACAGAAAAATAAAATCCATAAAAATAATCACTCACACAG
TTGTGTACATGGTAAATTGATAACCTGTAAACGGGCACGAGGTGTATGAAACAGAACACC
CGTGTTATAACGACTGTCGTTGCCCCACCATGCGAGGATAAATAAGTTACATACATGGTA
ACTTGTAAGTGGGCACGAGGTGTATGAAACAGAACAACCGTGTTATAACGACTGTTATTG
CCCCGCCATGCGAGGTTTAATAAATTACATTCATTCATA
| SUPERFAMILY |
Ribosomal_S5_D2-typ_fold (IPR020568) - T[10-177] 1.87E-48 - T[210-224] 1.87E-48 |
| Gene3D |
PNPase/RNase_PH_dom_sf (IPR027408) - T[13-309] 1.1E-91 |
| CDD |
Rrp45 (IPR033100) - T[16-273] 1.03822E-143 |
| Pfam |
ExoRNase_PH_dom1 (IPR001247) - T[50-172] 7.0E-18 |
| SUPERFAMILY |
ExoRNase_PH_dom2_sf (IPR036345) - T[194-296] 6.17E-31 |
| Pfam |
ExoRNase_PH_dom2 (IPR015847) - T[198-264] 2.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EXOS7_HUMAN | 30.196 % | 100 | 3.7E-24 |
| EXOS8_HUMAN | 27.132 % | 111 | 4.63E-28 |
| EXOS9_HUMAN | 38.424 % | 274 | 1.98E-88 |