Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S406.5.v1.A.nonSL32-1

Possible name(s)

MRPS9; RPS16

Gene model

KH2012:KH.S406.5

Location

KhS406 [19,760 / 21,152]

Sequences

Amino acid sequence

Length: 143

>KH.S406.5.v1.A.nonSL32-1
SLKTQSVQVYGRKKTATAVAHCKRGKGLIKVNGRPIELVEPETLRYKMEEPILLLGKTRF
EGVDIRIRVKGGGRVAQVYAIRQALAKSLVAYYQKFVDEASKKEIKDTLIQYDRTLLVSD
PRRKESKKFGGAGARARYQKSYR

Nucleotide sequence

Length: 474

>KH2012:KH.S406.5.v1.A.nonSL32-1
AGTTTGAAAACGCAATCCGTGCAAGTTTACGGTCGTAAGAAAACCGCGACCGCAGTGGCT
CACTGCAAGCGGGGGAAAGGTCTGATCAAAGTTAATGGACGACCCATCGAACTTGTGGAG
CCTGAAACACTCAGATATAAGATGGAGGAACCGATTCTACTTCTTGGCAAAACTCGTTTC
GAGGGTGTTGATATCCGCATCCGTGTGAAGGGGGGCGGACGGGTCGCACAAGTTTACGCT
ATTAGACAAGCACTTGCAAAGTCACTCGTCGCTTATTACCAAAAGTTTGTTGACGAAGCT
TCCAAGAAAGAGATCAAAGACACGTTGATCCAATACGACCGAACCCTGCTCGTATCCGAT
CCAAGGAGGAAAGAATCGAAGAAGTTTGGAGGAGCCGGTGCAAGAGCAAGATACCAGAAA
TCTTATCGTTAAGATTTTGTTCCCAAATAAAATCAAAACGAAGATTTACGTTTA

InterProScan

Gene3D	Ribosomal_S5_D2-typ_fold_subgr (IPR014721) - T[1-143] 6.9E-67
PANTHER	Ribosomal_S9 (IPR000754) - T[4-143] 1.8E-67
SUPERFAMILY	Ribosomal_S5_D2-typ_fold (IPR020568) - T[6-143] 7.21E-39
Pfam	Ribosomal_S9 (IPR000754) - T[11-143] 4.1E-33
ProSitePatterns	Ribosomal_S9_CS (IPR020574) - T[71-89] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS16_HUMAN	82.734 %	242	6.42E-84