- Transcript 'KH2012:KH.S423.6.v1....'
Transcript Model
Transcript Id
KH2012:KH.S423.6.v1.A.SL1-1
Possible name(s)
SMYD1; SMYD2; SMYD3
Gene model
Location
KhS423 [15,046 / 22,907]
Amino acid sequence
Length: 480
>KH.S423.6.v1.A.SL1-1
HISIITMSYPGVELFQTSAKGRGLKATRKFETGQAVLKQEPYAYAVMSSHIDVVCHYCLC
APGQPGAPVEDLHRCTGCKFAQYCTKECQKKAWPEHKQECAAIKRITPGKPVDQTRLVGR
ILWRRKREEKVNGEKKDGKENDEKKVELVKIEELEDHLSKRNAEEKEAIDEKVYSFGDYF
TYDEMPDSDEEMAHLFAIIDCNAIGLNDHRGVQTIGVGIYPGISMLNHDCSPNCVAMNNG
PRLEVRALRVIQPGEELCISYIDSLETTEKRREKLKLQYYFDCECDTCTKGEELENLKHA
LVSEDIKEESVKYINQFSKDMLKRIHKTKQNQNWERMCNQTLGTLAQQDCVIADTNVLKI
AVLNHAVEVQSFLRRQEPALEYAERVAAAYEKLLPPVHPTLGMYLMRLGVIQWQIQKTEA
AVATLGRAASIISKTHGDDHGMFKELLGLIHQCKMEAHMSKGAQREFRMAKKKAGLKLPA
Nucleotide sequence
Length: 2,088
>KH2012:KH.S423.6.v1.A.SL1-1
CATTTTTTTACACTATTAACACATTTCTATAATTACAATGTCTTATCCTGGAGTTGAACT
GTTTCAAACGTCCGCTAAAGGACGTGGTTTGAAAGCTACAAGGAAATTTGAGACAGGACA
AGCAGTTTTGAAGCAGGAGCCATACGCCTATGCTGTCATGAGCTCACATATCGACGTGGT
GTGCCATTACTGTTTATGCGCGCCAGGACAGCCGGGAGCGCCAGTGGAGGATCTCCACCG
TTGCACAGGGTGTAAGTTTGCTCAGTATTGCACAAAGGAATGCCAGAAGAAAGCTTGGCC
CGAACACAAGCAGGAGTGTGCTGCTATAAAACGGATAACACCTGGAAAGCCAGTGGATCA
GACCCGGTTAGTTGGGAGAATCCTATGGCGAAGAAAGAGAGAGGAAAAGGTAAACGGAGA
GAAGAAAGATGGAAAAGAGAATGATGAGAAGAAGGTGGAACTTGTAAAAATTGAGGAATT
AGAAGATCATCTAAGCAAGAGAAACGCCGAGGAAAAAGAAGCGATCGATGAAAAAGTTTA
TTCGTTTGGTGATTATTTCACTTATGATGAAATGCCGGATAGCGATGAAGAGATGGCGCA
TCTATTCGCTATTATTGATTGCAACGCAATAGGACTTAACGATCACCGTGGTGTGCAAAC
GATAGGGGTCGGAATCTACCCTGGGATCTCTATGTTGAACCATGACTGTAGTCCTAACTG
TGTGGCAATGAATAACGGACCAAGGCTGGAGGTGAGGGCGCTGCGGGTCATCCAGCCGGG
CGAGGAGCTATGCATATCATACATTGATTCGTTGGAGACAACAGAAAAGCGAAGAGAAAA
ACTTAAACTACAATATTACTTCGACTGTGAATGCGACACGTGTACCAAAGGTGAAGAACT
TGAAAACCTAAAACATGCGCTCGTGTCTGAAGATATCAAGGAAGAAAGCGTGAAATATAT
CAACCAATTCTCAAAGGACATGCTCAAACGGATACATAAAACTAAACAGAACCAAAATTG
GGAACGCATGTGTAATCAAACATTGGGGACTCTGGCGCAGCAGGATTGCGTCATAGCTGA
TACCAACGTACTCAAAATAGCAGTGCTAAACCATGCTGTTGAGGTCCAATCGTTTCTGCG
AAGACAAGAACCAGCGCTTGAATACGCGGAGCGAGTAGCCGCAGCTTACGAGAAGTTGTT
GCCTCCTGTTCACCCAACATTGGGAATGTACTTAATGCGGCTGGGTGTAATCCAGTGGCA
GATCCAAAAGACCGAAGCAGCTGTGGCGACACTTGGACGGGCAGCATCTATTATTTCGAA
AACACACGGCGACGACCATGGAATGTTTAAAGAACTGCTTGGACTTATCCACCAGTGCAA
AATGGAAGCCCACATGAGTAAAGGGGCCCAACGAGAGTTTAGAATGGCTAAGAAGAAAGC
TGGCTTAAAGTTGCCAGCGTAATGTTAATTGTATAGTTATAAATTATTCCGCTGTGGTTG
CTACCAGGCTAATGTAAATTATGAATGGGCCTCTGCGAAATAACGAACTTATATGTGACT
TATACAAGAGTAACTGTTGTTTTGTATTTAAAGATAAATTCGAACTGAATTATATTTATA
GCAGGTTGGGGGAAAATAATCAATGTTTACGTTTACTTTTATCGCCCCATTTGAAAGTAA
ACTGGATATATTTACAAAAATATATGACCTTACCACAGAGCGTTCTTAAATGTTACAGAC
ACGCTCTTTTCCCGTAGTTTTGTATATATTTATTCTAGAATAGTGCAACTAATCGTATAA
CAAGTGAACATGTCAAAACTTAAATTCATTCATCGTATCATAGAGCCTTAAAAGAACCAC
AATATTTCTGGTATAATTTTAATATATTAGGATGGGGGAAGATGGGACAGAACGTAATGT
TATAACAGTACAAAATACAATTGCAATTAACTACTTACTTACTTATTTATTAAATATGCG
TTTTTGTAACGATTGTGATAAATAATAAAAACTGTTTCTACAAAATTTAGACTGTTTTAT
TTGTCTTTTCGATTACTGCAAAAAAATAATAACCACAAAAAAAACAGG
| ProSiteProfiles |
SET_dom (IPR001214) - T[10-262] 14.468 |
| SMART |
SET_dom (IPR001214) - T[10-268] 2.1E-12 |
| Pfam |
SET_dom (IPR001214) - T[21-261] 1.5E-15 |
| Pfam |
Znf_MYND (IPR002893) - T[55-100] 3.9E-9 |
| ProSitePatterns |
Znf_MYND (IPR002893) - T[55-100] . |
| ProSiteProfiles |
Znf_MYND (IPR002893) - T[55-100] 11.974 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[361-437] 1.45E-5 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[388-468] 4.7E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMYD3_HUMAN | 32.184 % | 237 | 2.45E-73 |
| SMYD1_HUMAN | 37.161 % | 297 | 1.49E-95 |
| SMYD2_HUMAN | 28.636 % | 208 | 2.94E-62 |