- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'KH2012:KH.S460.4.v2....'
Transcript Model
Transcript Id
KH2012:KH.S460.4.v2.B.SL1-2
Possible name(s)
CLVS1; RLBP1; TTPAL
Gene model
Location
KhS460 [42,351 / 46,181]
Amino acid sequence
Length: 285
>KH.S460.4.v2.B.SL1-2
VALGKMTSRYVCTLSPELLEKAVRELNEPRDNDVRLKAIDALKKDFNSEKYGPLLRDDDL
FLLRFLRARKYKHAKALRVLHKYHSIRKKFPEVFDKVYHPESMREVMECGIVYAANGTMK
DGQSVIIYRPEKETAHMSFYDILACGQLAMDKLLDSEEYQICGGVTIDDFEHYDHEAMKE
VPASKYKKMTDLLQEATPVRIGPFHILNEGTKFDFMYSMMKPFMKRKLTKHITLHGKSID
KIVPDHDLHLLPPVMGGTGLEPEAAAKLWVESLKTGSGWKHLKHD
Nucleotide sequence
Length: 1,243
>KH2012:KH.S460.4.v2.B.SL1-2
CTGACCGGTACTTTAATTTTCTATTCATGTTATAGTTGAAAGTTAAGTTGCTCTAGGGAA
AATGACGTCAAGATATGTATGCACATTAAGCCCTGAACTCCTGGAAAAAGCTGTCAGAGA
ATTGAACGAACCACGTGACAATGACGTCAGATTAAAAGCGATCGACGCTTTAAAGAAAGA
TTTTAACTCGGAAAAATATGGCCCTTTACTACGTGACGACGATTTGTTTTTACTGAGGTT
TCTACGCGCAAGAAAATACAAACACGCAAAGGCGTTAAGGGTATTACACAAATATCACAG
CATTAGGAAGAAGTTTCCAGAAGTTTTTGATAAAGTATATCACCCTGAAAGCATGCGGGA
AGTCATGGAATGCGGAATCGTGTACGCTGCAAATGGGACCATGAAAGACGGCCAGTCAGT
GATCATCTATCGTCCCGAGAAGGAAACGGCGCATATGAGTTTCTATGATATTTTAGCCTG
TGGCCAGTTGGCCATGGACAAACTACTGGACAGCGAAGAATACCAGATCTGCGGCGGGGT
CACAATTGATGATTTTGAGCATTACGACCACGAAGCGATGAAGGAGGTACCAGCAAGTAA
GTATAAAAAGATGACTGATCTGCTCCAAGAAGCGACGCCGGTCCGAATCGGTCCATTTCA
CATTTTAAATGAAGGAACTAAGTTCGACTTTATGTACTCTATGATGAAACCGTTCATGAA
GCGAAAACTAACTAAGCACATCACATTACACGGAAAATCAATTGACAAGATTGTTCCTGA
CCACGACCTACACCTGCTACCTCCAGTGATGGGGGGCACGGGGCTGGAACCAGAGGCAGC
GGCCAAACTTTGGGTGGAATCTTTAAAAACGGGGAGCGGTTGGAAACATTTGAAACACGA
CTGAAAGAATTTATTAGTTATTTTTATTATTTTGTTGTAAAAATACTAAATTTAAACTAT
GTATGTATATATAAAGAGATGTATAAACGCGCGCAACGTTTTGTTTAATTAAATTTTAGT
ATTCATAATTACATTAAATATTTGGATATAATGTGCCAAAGGTGTCCCATCTCCCCCCAC
CCTACTATATGACGTGGCATACTTAATAAAATGTCGGAATTTTTGTCTAGTAATGCAATA
GTAAGTCACACTTTTATAATGCGTGTAATTTATAATGTTAATCTTTGAAAGTTTATTAAA
CACCAAGCAAGCAACCTTAAAACTGAGAAAACTCTCAAACCGA
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[10-91] 7.85E-16 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[38-81] 3.1E-6 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[58-83] 5.6E-6 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[90-267] 2.7E-37 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[99-263] 10.787 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[103-273] 4.45E-27 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[104-258] 2.23003E-11 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[106-260] 8.3E-4 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[116-256] 1.0E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 31.783 % | 136 | 6.05E-38 |
| RLBP1_HUMAN | 30.453 % | 123 | 4.43E-33 |
| CLVS1_HUMAN | 31.418 % | 112 | 1.23E-28 |