Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S494.5.v1.A.nonSL3-1

Possible name(s)

ALKBH1

Gene model

KH2012:KH.S494.5

Location

KhS494 [46,924 / 49,841]

Sequences

Amino acid sequence

Length: 342

>KH.S494.5.v1.A.nonSL3-1
RFFASCLTDFVVAPLILRSLNTYNEGGLSKMDDETNDNIFKQTFKYYKQKATQPSFDDVI
DFKNARNLDSVIVKQVPSPSNDLIGELGLKYKENWEIYELKKVPGLFIIPNSFTDKGRRM
WANKCVTEYFKKPHETNVDPFDDNPDKMWESSCEYLQSNAGKGSCTYEDSLSLLKCCPIW
KLRWATLGYHHNWNSKQYSEQPCSELPSELRKTSKLFASMIGTDDFKAEASIVNYYHVGN
ALSPHDDTSELYLEAPLVSLSFGLSAVFLIGGTSKDQKPEALFIRSGDVIIMSGASRLAY
HAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQVHS

Nucleotide sequence

Length: 1,654

>KH2012:KH.S494.5.v1.A.nonSL3-1
GACACCATAGAGGTTTTTCGCGTCGTGCCTGACCGATTTCGTCGTCGCCCCGTTGATATT
GAGGAGCTTGAATACATACAACGAGGGGGGCCTGAGTAAAATGGACGACGAGACAAACGA
CAACATTTTCAAACAAACTTTTAAATATTACAAACAAAAAGCCACACAGCCATCATTTGA
TGATGTAATTGATTTTAAAAACGCCCGGAACCTTGATTCTGTTATTGTTAAACAAGTACC
TTCACCTTCCAATGACTTGATTGGTGAACTTGGTTTAAAGTACAAAGAAAACTGGGAGAT
TTACGAGCTTAAAAAAGTCCCTGGTTTGTTTATTATTCCGAACTCATTCACTGACAAAGG
GCGAAGGATGTGGGCGAATAAATGCGTGACCGAGTATTTTAAGAAACCTCACGAAACAAA
CGTGGATCCGTTTGATGACAACCCAGATAAGATGTGGGAATCAAGTTGTGAATATTTACA
AAGCAATGCGGGCAAAGGTTCATGCACGTATGAAGATTCTCTATCCTTACTAAAGTGTTG
CCCGATATGGAAACTACGTTGGGCAACACTGGGTTACCATCATAATTGGAACAGCAAGCA
ATACAGCGAACAACCTTGTTCAGAACTCCCAAGCGAACTTCGTAAAACAAGCAAACTGTT
CGCTTCCATGATTGGAACGGATGATTTTAAAGCAGAGGCGTCCATAGTAAACTACTATCA
TGTTGGTAACGCCCTCTCACCCCATGATGACACATCAGAGTTGTATTTGGAAGCTCCGTT
GGTTTCACTGAGTTTCGGGTTGTCTGCAGTCTTCCTTATTGGAGGGACGAGTAAAGACCA
AAAACCCGAAGCTTTATTTATTCGTTCTGGTGATGTCATAATTATGAGTGGCGCTTCACG
CTTGGCTTACCACGCTGTACCAAGGATATTAAAACCTACCAGTGATGCCCAACTTAAATC
TTCCAGTGTTGCCGACAACTTGGATTTATTTATGTCACATTCTCGTCTTAACATTAACAT
ACGCCAAGTTCACTCCTAATAATACACCATATCTCAACGTCTATACAACCTCAATTTTGG
TGATTAGCATAGTTCTAAAGATTAATTAAACGAAATATATATTTGTTGATATTGTAAAAG
AGAATTTAATAGCTTGGCTGACAATTTGGACAGCTCGTTAGTGACCACTAGGTTGGAGCA
ATCGCTGTAGAGTTGCATACACCCACACTTGTAGCAGCGCCGAGCCTTGAACCTGTAACC
TACAAGTTAGAGGCAAGGACGCTAACCACCAATGTGACAATGCGGGAATATTAATAATAA
AACACAGATGTTTTGTTTTTTAACATTTCATTGCAGTAACACTTTGTCACTTTGGGTTTT
TTAAATCTTAATTTTTGCAAATATATTTTTCTTTTCGCATCTTCCTTTACAAAAGTACAA
ACTGCATAATAGAATTGCTTTAATAACAGTTCAAATCACTCCAAACAATTAAATGATATA
ATTGCAATGCCGCATATATTGTGTAACATCAATCTACACACAGTCAACCTGCAACTGCGT
GTTTGCATGTTCATAATAGATTCGTATACGAATCAACTCATGCGCGTATCAATACGTTAT
GCACCATCCATAGAATTAAACATATCTTAAGATA

InterProScan

PANTHER	Alkb (IPR004574) - T[31-341] 4.2E-95
Gene3D	AlkB-like_sf (IPR037151) - T[132-341] 1.6E-44
Pfam	AlkB-like (IPR027450) - T[181-338] 8.0E-36
ProSiteProfiles	Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[227-341] 9.024

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ALKB1_HUMAN	34.87 %	192	3.4E-58