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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S6...' > 
  2. Transcript 'KH2012:KH.S494.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.S494.5.v1.A.nonSL6-1

Possible name(s)

ALKBH1

Gene model

KH2012:KH.S494.5

Location

KhS494 [46,924 / 49,844]

Sequences

Amino acid sequence

Length: 342

>KH.S494.5.v1.A.nonSL6-1
RFFASCLTDFVVAPLILRSLNTYNEGGLSKMDDETNDNIFKQTFKYYKQKATQPSFDDVI
DFKNARNLDSVIVKQVPSPSNDLIGELGLKYKENWEIYELKKVPGLFIIPNSFTDKGRRM
WANKCVTEYFKKPHETNVDPFDDNPDKMWESSCEYLQSNAGKGSCTYEDSLSLLKCCPIW
KLRWATLGYHHNWNSKQYSEQPCSELPSELRKTSKLFASMIGTDDFKAEASIVNYYHVGN
ALSPHDDTSELYLEAPLVSLSFGLSAVFLIGGTSKDQKPEALFIRSGDVIIMSGASRLAY
HAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQVHS

Nucleotide sequence

Length: 1,657

>KH2012:KH.S494.5.v1.A.nonSL6-1
CCAGACACCATAGAGGTTTTTCGCGTCGTGCCTGACCGATTTCGTCGTCGCCCCGTTGAT
ATTGAGGAGCTTGAATACATACAACGAGGGGGGCCTGAGTAAAATGGACGACGAGACAAA
CGACAACATTTTCAAACAAACTTTTAAATATTACAAACAAAAAGCCACACAGCCATCATT
TGATGATGTAATTGATTTTAAAAACGCCCGGAACCTTGATTCTGTTATTGTTAAACAAGT
ACCTTCACCTTCCAATGACTTGATTGGTGAACTTGGTTTAAAGTACAAAGAAAACTGGGA
GATTTACGAGCTTAAAAAAGTCCCTGGTTTGTTTATTATTCCGAACTCATTCACTGACAA
AGGGCGAAGGATGTGGGCGAATAAATGCGTGACCGAGTATTTTAAGAAACCTCACGAAAC
AAACGTGGATCCGTTTGATGACAACCCAGATAAGATGTGGGAATCAAGTTGTGAATATTT
ACAAAGCAATGCGGGCAAAGGTTCATGCACGTATGAAGATTCTCTATCCTTACTAAAGTG
TTGCCCGATATGGAAACTACGTTGGGCAACACTGGGTTACCATCATAATTGGAACAGCAA
GCAATACAGCGAACAACCTTGTTCAGAACTCCCAAGCGAACTTCGTAAAACAAGCAAACT
GTTCGCTTCCATGATTGGAACGGATGATTTTAAAGCAGAGGCGTCCATAGTAAACTACTA
TCATGTTGGTAACGCCCTCTCACCCCATGATGACACATCAGAGTTGTATTTGGAAGCTCC
GTTGGTTTCACTGAGTTTCGGGTTGTCTGCAGTCTTCCTTATTGGAGGGACGAGTAAAGA
CCAAAAACCCGAAGCTTTATTTATTCGTTCTGGTGATGTCATAATTATGAGTGGCGCTTC
ACGCTTGGCTTACCACGCTGTACCAAGGATATTAAAACCTACCAGTGATGCCCAACTTAA
ATCTTCCAGTGTTGCCGACAACTTGGATTTATTTATGTCACATTCTCGTCTTAACATTAA
CATACGCCAAGTTCACTCCTAATAATACACCATATCTCAACGTCTATACAACCTCAATTT
TGGTGATTAGCATAGTTCTAAAGATTAATTAAACGAAATATATATTTGTTGATATTGTAA
AAGAGAATTTAATAGCTTGGCTGACAATTTGGACAGCTCGTTAGTGACCACTAGGTTGGA
GCAATCGCTGTAGAGTTGCATACACCCACACTTGTAGCAGCGCCGAGCCTTGAACCTGTA
ACCTACAAGTTAGAGGCAAGGACGCTAACCACCAATGTGACAATGCGGGAATATTAATAA
TAAAACACAGATGTTTTGTTTTTTAACATTTCATTGCAGTAACACTTTGTCACTTTGGGT
TTTTTAAATCTTAATTTTTGCAAATATATTTTTCTTTTCGCATCTTCCTTTACAAAAGTA
CAAACTGCATAATAGAATTGCTTTAATAACAGTTCAAATCACTCCAAACAATTAAATGAT
ATAATTGCAATGCCGCATATATTGTGTAACATCAATCTACACACAGTCAACCTGCAACTG
CGTGTTTGCATGTTCATAATAGATTCGTATACGAATCAACTCATGCGCGTATCAATACGT
TATGCACCATCCATAGAATTAAACATATCTTAAGATA

InterProScan

PANTHER
Alkb (IPR004574) - T[31-341] 4.2E-95
Gene3D
AlkB-like_sf (IPR037151) - T[132-341] 1.6E-44
Pfam
AlkB-like (IPR027450) - T[181-338] 8.0E-36
ProSiteProfiles
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[227-341] 9.024

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ALKB1_HUMAN 34.87 % 192 3.4E-58