Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S494.5.v1.A.nonSL6-1

Possible name(s)

ALKBH1

Gene model

KH2012:KH.S494.5

Location

KhS494 [46,924 / 49,844]

Sequences

Amino acid sequence

Length: 342

>KH.S494.5.v1.A.nonSL6-1
RFFASCLTDFVVAPLILRSLNTYNEGGLSKMDDETNDNIFKQTFKYYKQKATQPSFDDVI
DFKNARNLDSVIVKQVPSPSNDLIGELGLKYKENWEIYELKKVPGLFIIPNSFTDKGRRM
WANKCVTEYFKKPHETNVDPFDDNPDKMWESSCEYLQSNAGKGSCTYEDSLSLLKCCPIW
KLRWATLGYHHNWNSKQYSEQPCSELPSELRKTSKLFASMIGTDDFKAEASIVNYYHVGN
ALSPHDDTSELYLEAPLVSLSFGLSAVFLIGGTSKDQKPEALFIRSGDVIIMSGASRLAY
HAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQVHS

Nucleotide sequence

Length: 1,657

>KH2012:KH.S494.5.v1.A.nonSL6-1
CCAGACACCATAGAGGTTTTTCGCGTCGTGCCTGACCGATTTCGTCGTCGCCCCGTTGAT
ATTGAGGAGCTTGAATACATACAACGAGGGGGGCCTGAGTAAAATGGACGACGAGACAAA
CGACAACATTTTCAAACAAACTTTTAAATATTACAAACAAAAAGCCACACAGCCATCATT
TGATGATGTAATTGATTTTAAAAACGCCCGGAACCTTGATTCTGTTATTGTTAAACAAGT
ACCTTCACCTTCCAATGACTTGATTGGTGAACTTGGTTTAAAGTACAAAGAAAACTGGGA
GATTTACGAGCTTAAAAAAGTCCCTGGTTTGTTTATTATTCCGAACTCATTCACTGACAA
AGGGCGAAGGATGTGGGCGAATAAATGCGTGACCGAGTATTTTAAGAAACCTCACGAAAC
AAACGTGGATCCGTTTGATGACAACCCAGATAAGATGTGGGAATCAAGTTGTGAATATTT
ACAAAGCAATGCGGGCAAAGGTTCATGCACGTATGAAGATTCTCTATCCTTACTAAAGTG
TTGCCCGATATGGAAACTACGTTGGGCAACACTGGGTTACCATCATAATTGGAACAGCAA
GCAATACAGCGAACAACCTTGTTCAGAACTCCCAAGCGAACTTCGTAAAACAAGCAAACT
GTTCGCTTCCATGATTGGAACGGATGATTTTAAAGCAGAGGCGTCCATAGTAAACTACTA
TCATGTTGGTAACGCCCTCTCACCCCATGATGACACATCAGAGTTGTATTTGGAAGCTCC
GTTGGTTTCACTGAGTTTCGGGTTGTCTGCAGTCTTCCTTATTGGAGGGACGAGTAAAGA
CCAAAAACCCGAAGCTTTATTTATTCGTTCTGGTGATGTCATAATTATGAGTGGCGCTTC
ACGCTTGGCTTACCACGCTGTACCAAGGATATTAAAACCTACCAGTGATGCCCAACTTAA
ATCTTCCAGTGTTGCCGACAACTTGGATTTATTTATGTCACATTCTCGTCTTAACATTAA
CATACGCCAAGTTCACTCCTAATAATACACCATATCTCAACGTCTATACAACCTCAATTT
TGGTGATTAGCATAGTTCTAAAGATTAATTAAACGAAATATATATTTGTTGATATTGTAA
AAGAGAATTTAATAGCTTGGCTGACAATTTGGACAGCTCGTTAGTGACCACTAGGTTGGA
GCAATCGCTGTAGAGTTGCATACACCCACACTTGTAGCAGCGCCGAGCCTTGAACCTGTA
ACCTACAAGTTAGAGGCAAGGACGCTAACCACCAATGTGACAATGCGGGAATATTAATAA
TAAAACACAGATGTTTTGTTTTTTAACATTTCATTGCAGTAACACTTTGTCACTTTGGGT
TTTTTAAATCTTAATTTTTGCAAATATATTTTTCTTTTCGCATCTTCCTTTACAAAAGTA
CAAACTGCATAATAGAATTGCTTTAATAACAGTTCAAATCACTCCAAACAATTAAATGAT
ATAATTGCAATGCCGCATATATTGTGTAACATCAATCTACACACAGTCAACCTGCAACTG
CGTGTTTGCATGTTCATAATAGATTCGTATACGAATCAACTCATGCGCGTATCAATACGT
TATGCACCATCCATAGAATTAAACATATCTTAAGATA

InterProScan

PANTHER	Alkb (IPR004574) - T[31-341] 4.2E-95
Gene3D	AlkB-like_sf (IPR037151) - T[132-341] 1.6E-44
Pfam	AlkB-like (IPR027450) - T[181-338] 8.0E-36
ProSiteProfiles	Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[227-341] 9.024

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ALKB1_HUMAN	34.87 %	192	3.4E-58