Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S494.5.v1.A.nonSL7-1

Possible name(s)

ALKBH1

Gene model

KH2012:KH.S494.5

Location

KhS494 [46,924 / 49,534]

Sequences

Amino acid sequence

Length: 243

>KH.S494.5.v1.A.nonSL7-1
LKKVPGLFIIPNSFTDKGRRMWANKCVTEYFKKPHETNVDPFDDNPDKMWESSCEYLQSN
AGKGSCTYEDSLSLLKCCPIWKLRWATLGYHHNWNSKQYSEQPCSELPSELRKTSKLFAS
MIGTDDFKAEASIVNYYHVGNALSPHDDTSELYLEAPLVSLSFGLSAVFLIGGTSKDQKP
EALFIRSGDVIIMSGASRLAYHAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQ
VHS

Nucleotide sequence

Length: 1,347

>KH2012:KH.S494.5.v1.A.nonSL7-1
CTTAAAAAAGTCCCTGGTTTGTTTATTATTCCGAACTCATTCACTGACAAAGGGCGAAGG
ATGTGGGCGAATAAATGCGTGACCGAGTATTTTAAGAAACCTCACGAAACAAACGTGGAT
CCGTTTGATGACAACCCAGATAAGATGTGGGAATCAAGTTGTGAATATTTACAAAGCAAT
GCGGGCAAAGGTTCATGCACGTATGAAGATTCTCTATCCTTACTAAAGTGTTGCCCGATA
TGGAAACTACGTTGGGCAACACTGGGTTACCATCATAATTGGAACAGCAAGCAATACAGC
GAACAACCTTGTTCAGAACTCCCAAGCGAACTTCGTAAAACAAGCAAACTGTTCGCTTCC
ATGATTGGAACGGATGATTTTAAAGCAGAGGCGTCCATAGTAAACTACTATCATGTTGGT
AACGCCCTCTCACCCCATGATGACACATCAGAGTTGTATTTGGAAGCTCCGTTGGTTTCA
CTGAGTTTCGGGTTGTCTGCAGTCTTCCTTATTGGAGGGACGAGTAAAGACCAAAAACCC
GAAGCTTTATTTATTCGTTCTGGTGATGTCATAATTATGAGTGGCGCTTCACGCTTGGCT
TACCACGCTGTACCAAGGATATTAAAACCTACCAGTGATGCCCAACTTAAATCTTCCAGT
GTTGCCGACAACTTGGATTTATTTATGTCACATTCTCGTCTTAACATTAACATACGCCAA
GTTCACTCCTAATAATACACCATATCTCAACGTCTATACAACCTCAATTTTGGTGATTAG
CATAGTTCTAAAGATTAATTAAACGAAATATATATTTGTTGATATTGTAAAAGAGAATTT
AATAGCTTGGCTGACAATTTGGACAGCTCGTTAGTGACCACTAGGTTGGAGCAATCGCTG
TAGAGTTGCATACACCCACACTTGTAGCAGCGCCGAGCCTTGAACCTGTAACCTACAAGT
TAGAGGCAAGGACGCTAACCACCAATGTGACAATGCGGGAATATTAATAATAAAACACAG
ATGTTTTGTTTTTTAACATTTCATTGCAGTAACACTTTGTCACTTTGGGTTTTTTAAATC
TTAATTTTTGCAAATATATTTTTCTTTTCGCATCTTCCTTTACAAAAGTACAAACTGCAT
AATAGAATTGCTTTAATAACAGTTCAAATCACTCCAAACAATTAAATGATATAATTGCAA
TGCCGCATATATTGTGTAACATCAATCTACACACAGTCAACCTGCAACTGCGTGTTTGCA
TGTTCATAATAGATTCGTATACGAATCAACTCATGCGCGTATCAATACGTTATGCACCAT
CCATAGAATTAAACATATCTTAAGATA

InterProScan

PANTHER	Alkb (IPR004574) - T[2-242] 8.1E-83
Gene3D	AlkB-like_sf (IPR037151) - T[36-242] 5.8E-45
Pfam	AlkB-like (IPR027450) - T[81-239] 2.8E-36
ProSiteProfiles	Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[128-242] 9.024

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ALKB1_HUMAN	38.023 %	169	8.84E-51