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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...' > 
  2. EST 'AHC0AAA233YB15_RM1' > 
  3. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  4. Transcript 'KH2012:KH.L170.28.v4...' > 
  5. Transcript 'KH2012:KH.S494.5.v1....'

Transcript Model

Transcript Id

KH2012:KH.S494.5.v1.A.SL1-1

Possible name(s)

ALKBH1

Gene model

KH2012:KH.S494.5

Location

KhS494 [46,924 / 50,065]

Sequences

Amino acid sequence

Length: 342

>KH.S494.5.v1.A.SL1-1
RFFASCLTDFVVAPLILRSLNTYNEGGLSKMDDETNDNIFKQTFKYYKQKATQPSFDDVI
DFKNARNLDSVIVKQVPSPSNDLIGELGLKYKENWEIYELKKVPGLFIIPNSFTDKGRRM
WANKCVTEYFKKPHETNVDPFDDNPDKMWESSCEYLQSNAGKGSCTYEDSLSLLKCCPIW
KLRWATLGYHHNWNSKQYSEQPCSELPSELRKTSKLFASMIGTDDFKAEASIVNYYHVGN
ALSPHDDTSELYLEAPLVSLSFGLSAVFLIGGTSKDQKPEALFIRSGDVIIMSGASRLAY
HAVPRILKPTSDAQLKSSSVADNLDLFMSHSRLNINIRQVHS

Nucleotide sequence

Length: 1,878

>KH2012:KH.S494.5.v1.A.SL1-1
TTTGTTTGAGTAAAAATTAAGTAATTCTTTCTCTTTCATTGTGGTTTGTTGTGGAATCTT
CATTGTTGTCACTGTGCACTATGAGCCGAGCGATTCAAGTAGTAAAAGCTCACGTTCCAT
TGATTAGTTTCCCAACCCGTGTCAAGTGGTCACCAAAGCTTACACCCCCTCCTGCAATTA
ACGTCGCTGCTGTATCGCCACAACTCCTAACCAACCAAGTTCCAGACACCATAGAGGTTT
TTCGCGTCGTGCCTGACCGATTTCGTCGTCGCCCCGTTGATATTGAGGAGCTTGAATACA
TACAACGAGGGGGGCCTGAGTAAAATGGACGACGAGACAAACGACAACATTTTCAAACAA
ACTTTTAAATATTACAAACAAAAAGCCACACAGCCATCATTTGATGATGTAATTGATTTT
AAAAACGCCCGGAACCTTGATTCTGTTATTGTTAAACAAGTACCTTCACCTTCCAATGAC
TTGATTGGTGAACTTGGTTTAAAGTACAAAGAAAACTGGGAGATTTACGAGCTTAAAAAA
GTCCCTGGTTTGTTTATTATTCCGAACTCATTCACTGACAAAGGGCGAAGGATGTGGGCG
AATAAATGCGTGACCGAGTATTTTAAGAAACCTCACGAAACAAACGTGGATCCGTTTGAT
GACAACCCAGATAAGATGTGGGAATCAAGTTGTGAATATTTACAAAGCAATGCGGGCAAA
GGTTCATGCACGTATGAAGATTCTCTATCCTTACTAAAGTGTTGCCCGATATGGAAACTA
CGTTGGGCAACACTGGGTTACCATCATAATTGGAACAGCAAGCAATACAGCGAACAACCT
TGTTCAGAACTCCCAAGCGAACTTCGTAAAACAAGCAAACTGTTCGCTTCCATGATTGGA
ACGGATGATTTTAAAGCAGAGGCGTCCATAGTAAACTACTATCATGTTGGTAACGCCCTC
TCACCCCATGATGACACATCAGAGTTGTATTTGGAAGCTCCGTTGGTTTCACTGAGTTTC
GGGTTGTCTGCAGTCTTCCTTATTGGAGGGACGAGTAAAGACCAAAAACCCGAAGCTTTA
TTTATTCGTTCTGGTGATGTCATAATTATGAGTGGCGCTTCACGCTTGGCTTACCACGCT
GTACCAAGGATATTAAAACCTACCAGTGATGCCCAACTTAAATCTTCCAGTGTTGCCGAC
AACTTGGATTTATTTATGTCACATTCTCGTCTTAACATTAACATACGCCAAGTTCACTCC
TAATAATACACCATATCTCAACGTCTATACAACCTCAATTTTGGTGATTAGCATAGTTCT
AAAGATTAATTAAACGAAATATATATTTGTTGATATTGTAAAAGAGAATTTAATAGCTTG
GCTGACAATTTGGACAGCTCGTTAGTGACCACTAGGTTGGAGCAATCGCTGTAGAGTTGC
ATACACCCACACTTGTAGCAGCGCCGAGCCTTGAACCTGTAACCTACAAGTTAGAGGCAA
GGACGCTAACCACCAATGTGACAATGCGGGAATATTAATAATAAAACACAGATGTTTTGT
TTTTTAACATTTCATTGCAGTAACACTTTGTCACTTTGGGTTTTTTAAATCTTAATTTTT
GCAAATATATTTTTCTTTTCGCATCTTCCTTTACAAAAGTACAAACTGCATAATAGAATT
GCTTTAATAACAGTTCAAATCACTCCAAACAATTAAATGATATAATTGCAATGCCGCATA
TATTGTGTAACATCAATCTACACACAGTCAACCTGCAACTGCGTGTTTGCATGTTCATAA
TAGATTCGTATACGAATCAACTCATGCGCGTATCAATACGTTATGCACCATCCATAGAAT
TAAACATATCTTAAGATA

InterProScan

PANTHER
Alkb (IPR004574) - T[31-341] 4.2E-95
Gene3D
AlkB-like_sf (IPR037151) - T[132-341] 1.6E-44
Pfam
AlkB-like (IPR027450) - T[181-338] 8.0E-36
ProSiteProfiles
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[227-341] 9.024

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ALKB1_HUMAN 34.87 % 192 3.4E-58