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  1. Transcript 'Moocul.CG.ELv1_2.S44...'
  2. Transcript 'KH2012:KH.C1.513.v1....'
  3. Transcript 'KH2012:KH.S973.1.v1....'
  4. Transcript 'KH2012:KH.S516.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.S516.2.v1.A.SL2-1

Possible name(s)

HERC1; HERC2

Location

KhS516 [5,312 / 29,891]

Sequences

Amino acid sequence

Length: 1,811

>KH.S516.2.v1.A.SL2-1
GRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG
SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY
SWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYF
RLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQVFAWGDNDHGQQGNGGTT
VNRKPMKVQGLEGVKITKLACGSSHSIAFADTSHEAQTFEAIQFHENIDKLGSSYIKKSM
KQKKHHQHTTSYDDKSRVPHIRSKQLSTRGSLVQILLPVLTGNTGNQALQHLMNAMQIYL
ARSLLAYALTPSTSLSPSLVFCPPLESNQEVQVKDGNAHKPCCSSSIRASMSVHSASEIS
SLVAETITTPEEIAPPTPKKDLSVDAGEKMEGGRIKEEDERVYSDFGEDSMEGLLDLLKL
SVSGRMPFKDVKSISGILTSIVKSKAKMGSLLLERSISELEQVTNSVESLSADMKPLVKE
SNHPYPDDEETEGKVKIQGAHSLRVVFDRQCSTERRHDTLTFTDVTGAKTFAVLSGRDWS
DWSQSIKLPTNEFRWKFKSDGSVNGWGWKFTVYPIAPLSGATSDDTSMSDRRLLNNPSFP
FVTHLFEIYQAAEKDSDRSVCFKSVEKVVEAFTACLNYNCFGSDQRIWLLKQIKWMAMYR
RSTMKLQTLFEESSSTGTHHVTDNEPLKKVLSQMLQLQYEYEGPLVRTGKHLLYSPFFTE
LSSLCCELKIDEFIAKKETQMTSFNQYCLVSRTMDALLKHKPFPYQFIELVRLKIEEVCG
EDEDTSMNQYEDNTYFTHQIDEQLVTWINKRPDDWTLSWVGSGSIFGWGHNHRGQLGGPE
GAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPT
LIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLR
GDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVA
CGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACG
SQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAV
DNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNM
HKRRRTGAKLPDQIPLEYNLLQNIPFTVLRNRLIVLTQFSDLLCPVIPFLPLHNAPCDIT
DSVDTPIPIDQLRSLLVSSGKELVFKKVVQASMVRDKQHGPIIELNRIQVKRHREKSGLA
GPDGSRSVFGQAFQKMDCLLPDSVLLPHRIWKVKFLGESVDDCGGGYSESITEICDELQN
GSVPLLSGTPNGRDESGANRDCFILNSTTSSETHIKMFKFLGILIGIAMRTGSPLSINMA
EPVWKQLAGIKPCLKDISEIDKHFVPKSVFIRDCEADELESMQIQFATHSACGEEIPLGS
THQVVTAQNRNEYIRLAIQYRLHEFDQMVAAVREGMSFVIPVPLLSLFTASELETTVCGS
PDIPLHLLKSVSTCKGISPNDELIRWFWETLESFSDEQRSLFLRFVWGRTRLPRSIADFR
GRDFVIQVPDKYHPPDHYLPESYTCFFMLKLPRYSCKPVLEEKLKYAIHFCKSIDTDDYA
RIDLLDFDVMDEVSADVLTTRAARAAQQRRSVIESRFGFDFSSSDESFNPDEGFFRLSTS
SETERDWEMLV

Nucleotide sequence

Length: 5,836

>KH2012:KH.S516.2.v1.A.SL2-1
GTGGTCGTCACGCGATGGCGCTAACGTACGATGGCCATGTATATTCATGGGGAGATGGGG
AGGAAGGAAAACTCGGTCATGGAAGTAGAGCGGATGCTCTTACACCTCGGAAGATTGAGA
CCTTCCCTGAGAAGTGCATACGCGATATATCATGCGGCAGTTCACACAGCGCTGCTATTG
GTTCATCCGGTACCTTGTATACATGGGGGCATGGGATGTATGGGAGATTGGGACATGGGA
ATAATCATACTCTGCTCAAACCTAAACCGGTTCAAGCCTTGAGTGGCCAACAAGTGGTTC
AAGTCGCATGTGGCAGCAGAGATGCACAAACATTGTGTTTAACACAGGATGGGTTGGTTT
ATTCATGGGGTGATGGTGACTTTGGCAAGCTAGGTAGAGGGGGTAGTGATGGTTGTTGTG
TGCCCAAACCTGTGGAGAGACTCAGTGGGCAAGATGTTGTTAAAATAGAATGTGGGGCTC
AATTCTCCCTTGCATTATCAAGATGTGGGCTGGTATGGACTTGGGGTAAAGGGGATTATT
TTCGACTCGGCCACGGATCTGACCAGCATGTACGGCGCCCACAAGTGGTGGAGGGATTAC
GTGAACATAAAGTGGTTGATGTCGCTGTTGGGGCGCTGCATTGCCTCGCTGTTACTGAGG
GCGGGCAGGTATTTGCATGGGGAGACAACGACCATGGACAGCAAGGTAATGGGGGAACCA
CAGTAAATAGGAAACCAATGAAGGTACAAGGGTTGGAAGGAGTGAAGATTACTAAACTGG
CATGTGGTTCAAGTCATAGCATTGCATTTGCCGATACAAGCCACGAAGCTCAAACCTTCG
AAGCGATTCAGTTTCATGAAAACATCGACAAACTTGGTTCAAGTTACATCAAGAAGTCCA
TGAAGCAGAAGAAGCATCACCAACACACCACCTCATATGATGATAAATCACGTGTTCCAC
ATATTCGATCGAAACAATTATCAACAAGAGGAAGCTTGGTGCAAATTCTGCTTCCAGTTT
TAACTGGGAACACTGGAAACCAAGCATTACAGCATCTCATGAATGCTATGCAGATATACT
TAGCAAGGTCCCTGCTAGCTTATGCCCTCACACCTTCCACGTCATTATCTCCATCCTTGG
TGTTCTGCCCACCATTGGAGAGTAATCAAGAAGTTCAAGTGAAAGATGGGAACGCACATA
AACCTTGTTGTTCATCCTCCATTCGAGCATCAATGAGCGTCCACTCTGCATCCGAGATTT
CATCCTTGGTTGCCGAAACTATCACCACTCCCGAGGAGATTGCTCCTCCCACTCCTAAGA
AGGATCTTAGTGTGGATGCGGGGGAGAAGATGGAGGGAGGGAGGATAAAAGAGGAAGATG
AGAGAGTTTACTCCGATTTTGGGGAGGATAGCATGGAGGGGTTGCTTGATTTATTGAAAC
TATCTGTATCTGGCCGAATGCCATTCAAGGATGTCAAGTCAATATCGGGTATTCTTACTT
CTATTGTCAAGTCAAAGGCAAAGATGGGATCATTACTATTAGAGAGATCTATATCGGAGT
TAGAGCAAGTAACGAACAGTGTTGAATCGTTGTCGGCCGATATGAAGCCGTTAGTTAAAG
AAAGCAACCATCCCTACCCTGATGATGAGGAAACAGAAGGCAAAGTTAAGATACAAGGTG
CGCATTCCTTACGAGTTGTATTTGATCGGCAATGTTCCACCGAACGTAGACATGACACGC
TCACTTTCACTGATGTTACTGGAGCTAAAACATTCGCCGTGTTATCAGGAAGGGACTGGT
CTGATTGGTCGCAATCAATCAAACTCCCAACCAATGAATTTAGATGGAAATTCAAAAGTG
ATGGCTCGGTCAATGGGTGGGGTTGGAAGTTCACTGTGTACCCCATAGCGCCCCTTAGTG
GGGCAACAAGTGACGACACATCCATGAGCGATCGACGATTGTTAAACAACCCATCTTTTC
CATTCGTGACGCACTTGTTTGAAATATACCAGGCTGCCGAGAAGGATTCCGATCGTTCCG
TTTGTTTCAAATCTGTGGAGAAAGTCGTGGAGGCTTTCACTGCTTGTCTTAATTATAATT
GCTTTGGATCTGACCAACGTATCTGGTTGTTGAAGCAAATCAAATGGATGGCCATGTATC
GTCGATCAACCATGAAGCTACAAACATTATTTGAGGAAAGTAGTTCAACCGGAACGCATC
ATGTGACTGATAATGAACCTCTCAAGAAAGTGTTGTCACAAATGTTGCAACTGCAGTACG
AATATGAGGGACCATTAGTGAGAACGGGGAAACATCTTCTGTACAGTCCTTTCTTCACAG
AATTATCTTCTTTATGCTGCGAACTTAAAATTGATGAATTTATCGCGAAGAAGGAAACAC
AAATGACAAGTTTCAACCAATATTGCCTTGTATCGAGAACAATGGATGCTCTGCTTAAAC
ATAAGCCTTTCCCGTACCAGTTCATTGAGCTAGTGAGGTTGAAGATAGAGGAAGTGTGTG
GTGAAGATGAAGACACAAGCATGAACCAGTATGAGGATAACACATACTTTACACACCAGA
TAGATGAACAACTGGTTACTTGGATTAACAAACGACCCGATGATTGGACGTTATCCTGGG
TTGGCAGTGGGTCCATATTTGGGTGGGGGCATAACCATAGGGGGCAACTTGGGGGTCCAG
AGGGGGCTAAGGTGAAGATCCCGATCCCCTGCCCCTCCCTCGCTGCATTAAAACCCATAC
AGTTAGTGGGTGGGGAACAAACCTTGTTCACTGTGACTGGTGAAGGAAAGGTGTTTGCAA
CAGGCTATGGTGCTGGGGGAAGACTTGGTATTGGTAGCAACGAGTCGGTTGCTATTCCTA
CTCTAATTGAATCTATACAGCATGTCCATATTACACAGGTATCAGTGAATGCTGGAGGCA
AACACATCCTCGCGTTATCCAACGAAGGGGAGGTGTATAGTTGGGGGGAGGGGGTGGATG
GGAAACTGGGGCATGGTAACAGATCATCGCTTGACCACCCACGAATAATAGAAAGCTTAC
GAGGTGACCTCATAGTGAAGGTAGCAACGGGTGGTTCACATAGCGCTGCTATCAACGCTA
CTGGTGGTTTGTATACATGGGGTAAAGGAAGGTATGGGAGGCTGGGGCACGAGGATAGTG
AAGATCAACTTAAACCTAAACTGGTAAATGCATTGAAAGACAATTTAGTTGTAGACGTTG
CATGCGGCAATGGTGATGCACAAACCTTATGTATAACTGAGGGTACTGGAGGTTCTAGTG
TGGTGTGGTCGTGGGGGGACGGGGATTATGGGAAGCTGGGGAGAGGGGGGAGTGACGGAT
GCAAAGTACCCGCTATCATTGATACTTTGATGGGGAAACACATCACACATGTTGCTTGTG
GAAGTCAGTTCTCGCTTGCTTTATCTAAGGCTGGTGGTGTTTATACTTGGGGCAAAGGGG
ATTACTACAGACTTGGCCACGGTAGCGACGAACACGTACGTCGACCCAAACTTATTGAAT
CCCTTCGTGGTATGAAGGTGGTGGAAGTATCTGTTGGTTCGTTGCATTGCATCGCGGCTG
TCGATAATGGAGATGTCTATACGTGGGGGGATAATGATGAGGGACAGATAGGAGATGGGA
CAACACAAGCCACTCAAATCCCACGTTTAGTAGCTGCACTACAAGGCCATCATATATCCC
ATGTGTCGTGTGGTTCCGCACACACTGTCGCGTGGTCCCTACCCTCGGAGTCGCACAACA
TGCACAAGAGGCGCCGAACCGGAGCCAAGTTGCCCGACCAGATCCCACTTGAATACAATC
TACTACAGAACATTCCATTCACTGTATTAAGGAACAGACTTATTGTGTTGACCCAATTCT
CGGATTTGCTCTGCCCGGTCATTCCATTCTTGCCACTTCACAATGCTCCTTGTGACATCA
CAGACAGTGTTGACACGCCCATTCCCATCGACCAATTACGTAGCTTGCTTGTATCTTCCG
GTAAAGAACTCGTTTTCAAGAAAGTCGTCCAAGCTTCGATGGTCCGCGACAAACAACATG
GACCAATCATAGAGCTTAACCGGATACAGGTGAAGAGACACCGTGAAAAAAGTGGGTTGG
CCGGTCCTGATGGTTCACGATCAGTGTTCGGGCAAGCCTTCCAAAAGATGGATTGCTTGT
TGCCTGATAGTGTGTTGTTGCCTCATCGGATATGGAAGGTTAAGTTTCTAGGTGAATCAG
TAGACGACTGTGGTGGTGGCTACAGCGAATCGATCACCGAAATCTGTGACGAACTACAAA
ACGGATCGGTTCCCTTGCTCTCTGGCACCCCTAATGGCCGGGATGAGTCTGGGGCGAACC
GGGATTGCTTCATCCTCAATTCAACCACATCCAGTGAGACGCATATCAAGATGTTTAAGT
TCCTAGGGATCCTGATTGGTATTGCCATGAGAACTGGTAGTCCACTAAGCATCAACATGG
CTGAACCAGTGTGGAAACAACTGGCTGGCATCAAACCTTGCTTGAAGGATATATCAGAGA
TTGATAAGCATTTTGTGCCAAAGTCGGTTTTCATCCGAGATTGCGAAGCCGATGAGTTGG
AATCGATGCAAATACAGTTTGCTACTCATTCTGCTTGTGGGGAGGAAATACCACTGGGAA
GCACCCACCAAGTGGTGACCGCTCAAAATCGCAACGAATACATCAGGCTTGCAATACAAT
ACAGATTGCATGAGTTTGACCAGATGGTGGCAGCAGTGAGGGAAGGAATGTCGTTCGTGA
TTCCCGTGCCTTTGTTATCCCTGTTTACCGCAAGTGAATTGGAAACCACGGTATGTGGAA
GTCCAGACATTCCCCTTCACTTGCTCAAGTCAGTCTCCACATGCAAAGGTATCTCCCCTA
ATGATGAACTCATCCGATGGTTTTGGGAAACGCTTGAATCTTTCTCGGACGAGCAACGTT
CACTGTTCCTTAGGTTTGTGTGGGGGAGGACACGACTCCCGAGGTCAATCGCTGATTTCA
GGGGAAGAGACTTTGTCATACAAGTTCCTGACAAGTACCACCCACCAGACCATTACCTCC
CAGAGTCCTACACATGTTTCTTTATGTTGAAGCTACCAAGATACAGTTGCAAGCCTGTAT
TGGAAGAGAAGTTAAAATACGCGATCCACTTCTGCAAGTCAATTGACACAGATGATTACG
CGAGGATTGATTTGCTTGACTTTGATGTCATGGATGAAGTGTCGGCTGATGTTCTTACCA
CGCGTGCCGCACGTGCTGCACAACAGCGCCGAAGTGTCATCGAATCAAGATTCGGATTCG
ATTTCTCAAGTTCGGATGAATCGTTTAACCCAGATGAAGGTTTCTTCAGGTTGTCAACAT
CCAGTGAAACAGAGAGAGATTGGGAAATGCTGGTGTAAAATATAAATATAGTAGGGTGGG
GGTAGATAGGACAATTATTATATCCTTATTGTATACCAGTGTTAATTGTTTTAAACACGA
TCAGGTTATTTGGATATTATGTGCTAAAGGTGTCCTATCTTTCCCCACCCTACCATACAT
TTCAAGGCCTACTATATCTCCTTTCAACAATATTTATTTTATTTCTTATTCCTTTTGTAC
CAATAATTGGACAATATGTTATTTACTTCTCTTTCTTTGTTTTGAAAGTGAGGAATTAGA
CAAAAATGTTTTGCAACTGTATTGCTTATTTTAACCAATGTGCTGAATTCAAATTGCCTG
TTTTGTGAAGTTTTTGAAACCAGAAATGTTGTGTCTCGTAGTATATTTAACTGTGAGATT
TGGATAAACACATGAA

InterProScan

Gene3D
RCC1/BLIP-II (IPR009091) - T[1-273] 1.4E-108 - T[884-1255] 7.2E-141
SUPERFAMILY
RCC1/BLIP-II (IPR009091) - T[2-272] 2.88E-81 - T[876-1254] 1.13E-90
Pfam
Reg_chr_condens (IPR000408) - T[10-59] 1.5E-14 - T[62-105] 7.5E-12 - T[116-165] 5.6E-14 - T[169-217] 9.1E-12 - T[221-268] 7.8E-13 - T[934-985] 2.0E-6 - T[988-1037] 6.1E-12 - T[1041-1083] 1.4E-11 - T[1101-1147] 1.1E-11 - T[1151-1198] 7.0E-12 - T[1202-1250] 6.1E-14
ProSiteProfiles
Reg_chr_condens (IPR000408) - T[11-62] 16.172 - T[63-114] 13.398 - T[117-168] 14.122 - T[169-220] 15.087 - T[221-272] 15.449 - T[883-934] 11.007 - T[935-988] 13.64 - T[989-1040] 15.63 - T[1041-1092] 13.64 - T[1099-1150] 13.559 - T[1151-1202] 15.127 - T[1203-1254] 15.67
ProSitePatterns
Reg_chr_condens (IPR000408) - T[49-59] . - T[1027-1037] .
SMART
Beta-propeller_rpt_TECPR (IPR006624) - T[81-124] 280.0 - T[901-941] 170.0 - T[953-996] 33.0 - T[1117-1158] 150.0 - T[1221-1265] 11.0
PRINTS
Reg_chr_condens (IPR000408) - T[884-900] 8.6E-13 - T[989-1005] 8.6E-13 - T[1027-1043] 8.6E-13 - T[1043-1057] 8.6E-13 - T[1140-1158] 8.6E-13 - T[1198-1219] 8.6E-13
CDD
HECT_dom (IPR000569) - T[1366-1735] 4.48975E-104
SUPERFAMILY
Hect_E3_ubiquitin_ligase (IPR035983) - T[1398-1731] 6.93E-86
SMART
HECT_dom (IPR000569) - T[1399-1745] 1.9E-50
ProSiteProfiles
HECT_dom (IPR000569) - T[1402-1737] 47.128
Pfam
HECT_dom (IPR000569) - T[1433-1732] 3.1E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
HERC2_HUMAN 56.219 % 1947 0
HERC1_HUMAN 37.695 % 652 0
HECD3_HUMAN 29.713 % 177 3.22E-45





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