Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S521.4.v1.A.SL3-1

Possible name(s)

GABARAP; GABARAPL1; GABARAPL2

Gene model

KH2012:KH.S521.4

Location

KhS521 [9,991 / 12,338]

Sequences

Amino acid sequence

Length: 124

>KH.S521.4.v1.A.SL3-1
SSKLYTKMKWQYKEEHTFDKRRTEGEKIRKKYPDRVPVIVEKAMKARIGDLDKKKYLVPS
DLTVGQFYFLIRKRIHLRPEEALFFFVNNVIPPTSTTMGQLYQEHHEEDFFLYIAYSDES
VYGA

Nucleotide sequence

Length: 921

>KH2012:KH.S521.4.v1.A.SL3-1
TTGTATTAATAATTTCATATCGTACACGATTATTGTCTTATTGATAATCAAGCAAACTTT
ATACAAAAATGAAGTGGCAATATAAAGAAGAACATACTTTCGATAAGAGACGAACAGAAG
GAGAGAAAATTCGCAAGAAGTATCCCGACCGAGTTCCTGTCATTGTGGAGAAAGCAATGA
AAGCAAGAATTGGTGATTTGGATAAGAAGAAATACCTAGTTCCTTCAGATTTAACTGTTG
GTCAATTTTACTTTTTGATTCGCAAACGAATCCATCTTCGCCCAGAAGAAGCTTTGTTCT
TCTTTGTAAACAATGTGATCCCACCAACAAGCACAACCATGGGACAACTTTATCAGGAGC
ACCATGAAGAAGATTTCTTCTTGTACATCGCATACAGTGATGAAAGTGTCTATGGGGCGT
GACTTGTCGTTTATCAACACTTGTTGATGATTGTCATCAACTATGGATTAATGACGATGT
GGGCAATTATAAACTGCCGTGTCCAATTTATTTGTACTGTGTAAAGTGTTTATCATTGCC
GTGTATGCGGAGTCCTTTTCTTGTGTTGTGTAAATATTATGTACTGATCATGTATTTCGT
ATTGACAATAGAAACAGGATATTTAGTTTAAACAACATTTAGCGTGGTGTAATATATATT
ACCTTTCTTCTTTTTGCTTTTTCTTTAAAATAGTAGTTTAAACCTTTCCATCACATATCT
CGTGAATAGAACTAAAATGAGTTTGATTTTATGTTTTTTGGATGTTTATTCAACTTACCA
TTATTTTAACATAATAAGTTACGTTAGCACTTGTGTTTTTATTGATGATTGTTTATGATG
TTTCTTAAACACCTTTAACTGTTGCTGAAATATTTCCCAAAATAATTGGACTTTAAATAA
ATTTGCAACAAAACTGCGTAA

InterProScan

PANTHER	Atg8-like (IPR004241) - T[5-123] 2.2E-79
SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[8-123] 4.39E-43
CDD	Atg8-like (IPR004241) - T[12-123] 3.42555E-69
Pfam	Atg8-like (IPR004241) - T[20-123] 1.6E-48

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
GBRAP_HUMAN	92.241 %	221	2.59E-76
GBRL1_HUMAN	83.621 %	207	7.82E-71
GBRL3_HUMAN	79.31 %	194	1.16E-65