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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S9...' > 
  2. Transcript 'Harore.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.S521.4.v1....' > 
  4. Transcript 'KH2012:KH.S521.4.v2....'

Transcript Model

Transcript Id

KH2012:KH.S521.4.v2.R.ND1-1

Possible name(s)

GABARAP; GABARAPL1; GABARAPL2

Gene model

KH2012:KH.S521.4

Location

KhS521 [9,991 / 12,123]

Sequences

Amino acid sequence

Length: 87

>KH.S521.4.v2.R.ND1-1
VIVEKAMKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPEEALFFFVNNVIPPTSTT
MGQLYQEHHEEDFFLYIAYSDESVYGA

Nucleotide sequence

Length: 763

>KH2012:KH.S521.4.v2.R.ND1-1
GTCATTGTGGAGAAAGCAATGAAAGCAAGAATTGGTGATTTGGATAAGAAGAAATACCTA
GTTCCTTCAGATTTAACTGTTGGTCAATTTTACTTTTTGATTCGCAAACGAATCCATCTT
CGCCCAGAAGAAGCTTTGTTCTTCTTTGTAAACAATGTGATCCCACCAACAAGCACAACC
ATGGGACAACTTTATCAGGAGCACCATGAAGAAGATTTCTTCTTGTACATCGCATACAGT
GATGAAAGTGTCTATGGGGCGTGACTTGTCGTTTATCAACACTTGTTGATGATTGTCATC
AACTATGGATTAATGACGATGTGGGCAATTATAAACTGCCGTGTCCAATTTATTTGTACT
GTGTAAAGTGTTTATCATTGCCGTGTATGCGGAGTCCTTTTCTTGTGTTGTGTAAATATT
ATGTACTGATCATGTATTTCGTATTGACAATAGAAACAGGATATTTAGTTTAAACAACAT
TTAGCGTGGTGTAATATATATTACCTTTCTTCTTTTTGCTTTTTCTTTAAAATAGTAGTT
TAAACCTTTCCATCACATATCTCGTGAATAGAACTAAAATGAGTTTGATTTTATGTTTTT
TGGATGTTTATTCAACTTACCATTATTTTAACATAATAAGTTACGTTAGCACTTGTGTTT
TTATTGATGATTGTTTATGATGTTTCTTAAACACCTTTAACTGTTGCTGAAATATTTCCC
AAAATAATTGGACTTTAAATAAATTTGCAACAAAACTGCGTAA

InterProScan

PANTHER
Atg8-like (IPR004241) - T[1-86] 1.8E-57
CDD
Atg8-like (IPR004241) - T[1-86] 3.62259E-53
Pfam
Atg8-like (IPR004241) - T[1-86] 6.3E-39
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[1-86] 1.26E-30

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GBRAP_HUMAN 95.349 % 169 2.6E-56
GBRL1_HUMAN 86.047 % 159 1.72E-52
GBRL3_HUMAN 80.233 % 147 4.95E-48