- Transcript 'KH2012:KH.S544.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.S544.3.v1.A.nonSL2-1
Possible name(s)
DMRT1; DMRTA1; DMRTA2
Gene model
Location
KhS544 [5,122 / 10,628]
Amino acid sequence
Length: 581
>KH.S544.3.v1.A.nonSL2-1
QTVRLTGMATDRGIEMNETARHMRGPAYSTAMMANSTGHNNYPGLAQAVSNPAAAALFLR
ASDKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCPKCTLIAERQRVMAAQVALRRQQ
AQEENETRELRLLYGATQGLAQMEQQHMSQMVVSNSRDNSPNNRQSPPSTTYISNEKTSP
TGAKRARLELYNPNTGEQHSPAQDMASSPVEFRPSNSSSPLECTAQITESNDGKLISPAS
LENRSETVSGSDSPKADTRNAEIPQTKPDSSDENLLNQATTEPMKPEGQLTRSNLVMLCR
VFPQKNPSELETILRLCNGDVVKAIEKTLNNEENQTKPRQRKRSRMSSSPIEVNTSVSSA
SPPSLPVSRLLQYTPPGNRSDSPSSSVGCDSSTPPTPGTTSQTGSAPFHFQSSTPSHPFK
SAFHPMSSEVVHATSTQSALAAANFTGAFNVASRPRNVHNMSAAQPSPAGHFPVNNFNPL
NPFVAYNTQSQHPATRGMAAFGMSPYVASSFMPSLAAAAAAGFRSHPVVQGLAKDYTFSG
FMRGMSAMAYNKDKLRYSNGVPSSYRFDSSASEASSCSSDK
Nucleotide sequence
Length: 2,170
>KH2012:KH.S544.3.v1.A.nonSL2-1
ATATTGCCTTGATACCTTGCTTAGAACAGTGAATACATATAAATCGTATTAAAAGCTTTA
GAGTGTTAAACCAAAGAGTTACAGAAATTATAGCAAACAGTTCGTTTAACTGGCATGGCA
ACCGACAGAGGAATTGAAATGAATGAAACAGCTCGACACATGAGAGGACCTGCTTACAGT
ACAGCTATGATGGCAAACTCGACCGGGCATAATAATTACCCCGGCCTGGCCCAGGCGGTC
TCAAACCCCGCAGCGGCGGCTTTATTTCTTCGGGCCTCCGACAAATACCCAAGAACGCCT
AAGTGCGCAAGATGCCGCAACCATGGAGTTGTGAGTGCGTTGAAAGGACATAAGAGATAC
TGCCGATGGAAAGATTGCTTGTGCCCGAAATGTACTCTGATCGCTGAACGACAACGAGTC
ATGGCAGCCCAGGTTGCCCTTCGACGACAACAAGCACAAGAGGAAAACGAAACCCGTGAA
TTAAGGCTGTTGTACGGTGCTACACAAGGTCTTGCACAGATGGAGCAACAACATATGTCT
CAGATGGTGGTTTCTAACTCGAGAGATAATTCGCCAAATAACCGACAGTCGCCACCATCG
ACAACATACATTAGCAACGAAAAGACATCGCCGACAGGTGCAAAACGCGCGCGGCTGGAG
TTGTATAATCCGAACACCGGCGAGCAGCACTCCCCTGCTCAGGACATGGCGTCTTCTCCA
GTTGAGTTTCGGCCATCCAACAGTTCATCTCCGTTAGAATGCACCGCACAAATTACAGAA
TCCAATGACGGAAAGTTAATCTCGCCTGCTTCGTTGGAAAATCGCTCCGAAACCGTTTCC
GGCAGCGATTCACCAAAAGCCGATACCCGGAATGCTGAAATTCCGCAAACAAAACCAGAT
TCGTCTGATGAGAACTTGTTAAACCAAGCAACAACAGAACCGATGAAACCAGAAGGCCAG
TTAACAAGATCCAACTTAGTAATGTTGTGCCGAGTGTTCCCGCAAAAGAATCCATCCGAG
CTGGAAACGATTCTCCGCCTTTGTAATGGAGATGTTGTAAAAGCAATTGAAAAGACTCTC
AACAACGAAGAAAATCAAACAAAACCTAGACAACGCAAGAGATCTCGCATGAGTTCGTCC
CCGATCGAAGTCAACACTTCCGTATCTTCTGCAAGTCCACCGAGTCTCCCAGTTTCACGA
CTTCTTCAATACACTCCACCAGGCAATAGGTCGGACAGCCCATCATCAAGCGTTGGTTGC
GACAGCTCAACACCCCCTACACCAGGAACTACATCCCAAACCGGATCTGCCCCTTTCCAC
TTTCAATCGTCCACCCCGAGCCACCCTTTTAAATCGGCCTTCCATCCGATGTCAAGCGAA
GTCGTACACGCTACAAGCACCCAAAGCGCTCTAGCTGCCGCTAACTTTACCGGCGCCTTC
AACGTCGCTTCAAGACCCCGAAACGTACACAACATGTCCGCTGCTCAGCCCTCGCCTGCT
GGGCATTTCCCTGTTAACAACTTCAACCCTCTTAACCCATTCGTAGCGTACAATACGCAG
AGCCAGCATCCTGCAACTCGTGGCATGGCTGCATTTGGGATGTCGCCCTACGTGGCGTCT
AGTTTTATGCCAAGTCTTGCTGCCGCCGCCGCGGCCGGGTTTCGAAGCCATCCCGTCGTA
CAAGGCCTTGCAAAGGACTACACATTCAGTGGCTTTATGCGTGGCATGAGTGCCATGGCT
TACAACAAAGATAAGCTACGTTACAGCAATGGGGTCCCGAGCAGTTATAGATTCGATTCG
TCCGCTTCAGAGGCCTCATCATGCTCAAGTGACAAGTAGAAAGTTTTAAACATAAACTAA
CAAACTGTTTGCTAAAAAACTGTTTGCCAATTGGAGCTCCTGTATTTAGTTTGAATTGTA
TACATCTCATTTGAATGGCGAAGCTGCTTTTACAAATTGATTATTTTTTAACAGAGCCAA
TGCATTCAAACTGCCTACTATAGTAGAACCTGACGTTTTAACATGACGAATTTGTAGGTT
AAACATAACGTTGATTTGTACCAACCACATTTTTTCATTTTATTTATGTATAACTGTCAT
TACATTCATTTTGCACGCCGTGAGTTTTTTCTTAGTATATATGTACTAAAATAAACAAAA
CACTTCAAAA
| PANTHER |
DMRT/dsx/mab-3 (IPR026607) - T[8-278] 3.8E-93 - T[282-510] 3.8E-93 |
| Gene3D |
DM_DNA-bd_sf (IPR036407) - T[64-113] 2.0E-23 |
| SUPERFAMILY |
DM_DNA-bd_sf (IPR036407) - T[65-113] 1.31E-17 |
| SMART |
DM_DNA-bd (IPR001275) - T[67-120] 5.8E-28 |
| Pfam |
DM_DNA-bd (IPR001275) - T[67-113] 1.5E-22 |
| ProSiteProfiles |
DM_DNA-bd (IPR001275) - T[71-118] 14.371 |
| ProSitePatterns |
DM_DNA-bd (IPR001275) - T[71-100] . |
| Pfam |
DMA (IPR005173) - T[292-327] 9.8E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMTA2_HUMAN | 40.532 % | 185 | 1.37E-51 |
| DMRTA_HUMAN | 88.571 % | 138 | 3.34E-35 |
| DMRT1_HUMAN | 79.688 % | 118 | 6.29E-29 |