- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C7.240.v2....' >
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- Transcript 'KH2012:KH.S555.1.v2....'
Transcript Model
Transcript Id
KH2012:KH.S555.1.v2.A.nonSL3-1
Possible name(s)
HTR1A; HTR5A; HTR7
Gene model
Location
KhS555 [26,931 / 32,141]
Amino acid sequence
Length: 322
>KH.S555.1.v2.A.nonSL3-1
SRKRECDVTKKSIMLELDNSSLPGNKTEVYKLPQVEIVFLLIVIVIGSIGNLLIIGSIRC
ERRLKNSGVGFITNLALADLAITAWYMPVVLANVLSGYRNVFEGSWLCEFTGFLSCLCCE
ASLCTLMFISMDRYWKLIRPGSYETWFSKRKTLGWIAFIWIASFLIALPLIVGWQAYGYN
IFLVSTAIFVPLCATGFFYFNIFAHVRRTRKKNATREIASPNGSSIRAIQKQSTVSESEE
GQSSSSVVQNVRPHHSRHSSINSHKNARSKRVGERERALMLTLMVVVVFFVLFWCPIWRY
DVGVASKCECVGETGLWLACSK
Nucleotide sequence
Length: 1,474
>KH2012:KH.S555.1.v2.A.nonSL3-1
CAGTTGATTGTGGAAGCATCGAAGCTAGTAACGTGTTGTAGTGTAAAGGTATTGTTACGT
GTAAGGTGTTATTGTGACGACACAGTTAAAAAGATAGTGAAGCAGAAAACGTGAATGTGA
CGTCACAAAGAAGTCGATTATGTTAGAATTAGACAACTCTTCGTTGCCAGGCAACAAAAC
GGAAGTTTATAAACTGCCACAAGTCGAAATCGTGTTTCTGTTGATTGTCATCGTGATCGG
GTCGATCGGAAATCTGTTGATTATCGGCTCCATAAGATGCGAACGCCGTCTCAAGAACTC
AGGAGTTGGTTTTATTACAAACCTAGCGCTGGCTGATCTGGCAATCACAGCATGGTATAT
GCCGGTTGTGCTTGCCAATGTTCTGTCGGGATACAGGAACGTATTTGAGGGTTCGTGGTT
ATGCGAGTTCACGGGATTCTTGTCTTGTTTATGTTGCGAGGCATCCTTGTGCACGTTGAT
GTTTATATCAATGGACAGATATTGGAAACTTATTCGTCCTGGTTCATATGAGACTTGGTT
CAGCAAAAGAAAGACACTGGGGTGGATTGCATTTATCTGGATTGCGAGTTTCTTGATCGC
ATTACCATTGATTGTGGGCTGGCAAGCATACGGGTACAACATATTCCTTGTATCGACCGC
CATCTTTGTTCCCTTATGCGCCACCGGGTTCTTCTACTTCAATATTTTCGCGCACGTGAG
ACGGACAAGGAAAAAAAACGCGACCCGGGAAATAGCGTCACCTAACGGAAGCTCGATACG
GGCAATCCAGAAGCAATCAACCGTATCTGAATCTGAAGAAGGTCAAAGTTCATCGTCAGT
CGTGCAGAACGTTCGTCCGCACCATTCGCGACATAGTTCTATAAATAGTCACAAAAACGC
TCGATCAAAGCGGGTTGGGGAACGAGAACGAGCGCTGATGTTGACCTTAATGGTCGTTGT
TGTATTCTTCGTATTATTCTGGTGTCCCATATGGCGTTATGACGTTGGTGTGGCATCAAA
ATGTGAGTGCGTTGGCGAAACGGGCTTGTGGTTGGCTTGCTCTAAGTAACAGTGCCATTA
ATAGCTTCATATACGGGATCATGAATCGAAACTTTCGTCGAGGTTACGTCACTCTCATAA
AACGTATGCGTGACGTCATATGTTGCGGACGAAACGTGACTGGGGCAATGTCGAAAACGA
AGCCCTGGTTATGCGTAACGCAGCAGAAGGATACGTCAGAGGATGACGTCAAACAACACA
GCGTTAAATTTGGATAAACTGTTAGGATTATTTTTATTACTGTATTTTTTTTACTTTTTA
CCGCCGTACAGGGTACTCTTGTTTTTTATTTATATTGCATAAATGTTGCCAATGTTGTTG
CTGAAATAAAGTATTGTTTTTATTAAATTGTTCATTTTTATGAAACCTTGATATTCAAAA
TATATATCCTCTTGTGTCTTTAGATATAGTAGGA
| PANTHER |
Mel_rcpt_1 (IPR027459) - T[14-322] 1.6E-91 |
| PRINTS |
GPCR_Rhodpsn (IPR000276) - T[35-59] 3.8E-21 - T[68-89] 3.8E-21 - T[115-137] 3.8E-21 - T[151-172] 3.8E-21 - T[180-203] 3.8E-21 - T[279-303] 3.8E-21 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[50-297] 2.4E-34 |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[50-297] 24.043 |
| ProSitePatterns |
GPCR_Rhodpsn (IPR000276) - T[121-137] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| 5HT7R_HUMAN | 26.027 % | 95.1 | 8.23E-22 |
| ADA1B_HUMAN | 26.129 % | 88.2 | 2.03E-19 |
| 5HT1A_HUMAN | 24.615 % | 90.9 | 1.86E-20 |