Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'ma337i06' > 
  2. Transcript 'KH2012:KH.C2.652.v2....' > 
  3. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  4. Transcript 'Cisavi.CG.ENS81.R122...' > 
  5. Transcript 'KH2012:KH.S562.6.v1....'

Transcript Model

Transcript Id

KH2012:KH.S562.6.v1.A.ND1-1

Possible name(s)

CARF

Gene model

KH2012:KH.S562.6

Location

KhS562 [27,428 / 36,061]

Sequences

Amino acid sequence

Length: 786

>KH.S562.6.v1.A.ND1-1
NTEEMETENGGTTATDTTHKEKIVHSMDEVNQTIKDFETSSQTKFLKHSGKIYDNTPQKS
KVFWRVDDTGDMVPYFTTGFTKYICIHSRDRHSYLSKKCTSEKDKLLRMQKSKKRDCGAT
ISVSHMVQFPELKKPTNVAIYQKTLATRFIKYRLTTDNNIKQEPTFRIVFPQNTDHSGHV
IGGQDIKGEMDERLVLKIDEYVSNGVSNVKHIMNNLEKFVTEDLFKDGSIPLLSNKRYFP
TAKAIKRQYHKSFLQKQLCEYDQDTLMRDIDHWKQEISPEDNILFRPFIPTPPIDKDDTL
SSLDHQFLFVHQLGWQRELLHRYGNDFCFLDFTVKQTRFALPLHFLCVKTNYSHQVVATF
VTQENSVRHIAEALDILKHWCENWEPKFIFTDNNEARTEAIEQVFSGCKVLISELHKERA
WLKRGYLSDAKVTPEAQEQIVALLKEIAHSEDEASFQKSHDELMNREDSKMNSKLQSYLN
SWFSIKERWCWLYWPEDIRILMLTNYGLERHHNLFEDIQTKFRPRKVLPFSISFLHKHFL
PEHYKQYRMDNSSSFKLETSDFMPADIAQHLCIKEHCIRQLSEANSRQPDCIECDCDEFT
LKYEDGTATKVIIPPSNFPRCSCAVYRASFLPCFHIFTLFPICENFSWASLPCWFRDSVF
LSLDPHVCNLPATVQVMIEQPSELENETVEHVLELSSVTVSPSSPTTDLNTDIRRLLDQI
QAVCESAPNEELATTKTDLEIILYRLQNGTDNACTLNRADVQKRKTSTQYEFEPEAKVRL
ADFSSN

Nucleotide sequence

Length: 2,517

>KH2012:KH.S562.6.v1.A.ND1-1
GAAATTAATTTGTGTTGTGAAAGTTGCAATTAAAGAAAGAGTTTACGTATTTTGTTTTTA
TATTATTTATTTGTGGAATATTTGAAATACAGAGGAAATGGAAACAGAAAATGGCGGTAC
AACAGCGACTGATACCACACACAAGGAAAAGATCGTACATTCTATGGATGAAGTAAATCA
AACAATCAAAGATTTTGAAACTTCTTCACAAACCAAATTCCTAAAACATTCCGGCAAAAT
TTATGATAATACGCCACAGAAAAGCAAAGTTTTCTGGAGAGTGGACGATACTGGTGATAT
GGTGCCTTACTTTACAACTGGGTTTACAAAGTACATTTGTATTCATAGTAGAGATAGACA
TTCGTATCTTAGCAAGAAGTGCACTTCAGAAAAAGATAAATTGTTGCGAATGCAAAAGAG
TAAAAAGAGAGATTGTGGAGCTACTATTAGTGTATCGCATATGGTGCAATTCCCAGAGCT
AAAGAAGCCAACCAATGTTGCGATTTATCAGAAAACTTTGGCCACCAGGTTCATTAAATA
TAGATTAACTACGGATAATAATATTAAACAAGAACCAACCTTTCGAATTGTTTTTCCACA
AAACACCGACCACTCTGGCCATGTAATAGGAGGGCAGGATATCAAAGGTGAAATGGACGA
ACGCTTGGTGTTGAAAATCGATGAATACGTTAGTAATGGGGTTTCAAATGTGAAACATAT
TATGAACAATCTGGAGAAGTTTGTCACAGAGGATTTGTTCAAAGATGGAAGTATACCACT
GCTTTCAAATAAACGATATTTCCCAACAGCTAAAGCTATTAAGAGACAATATCACAAATC
CTTCCTCCAAAAACAGTTATGTGAATATGACCAAGACACTCTCATGCGCGACATTGATCA
TTGGAAGCAAGAAATATCTCCTGAAGATAATATTTTGTTCCGGCCGTTTATTCCTACCCC
TCCTATTGATAAAGATGACACTTTGTCCTCTCTTGATCATCAATTCCTCTTCGTTCATCA
ACTAGGCTGGCAAAGGGAGCTTTTGCATCGTTACGGAAACGATTTTTGTTTCCTGGACTT
CACAGTAAAACAGACACGATTCGCGCTACCCCTGCATTTTCTTTGTGTGAAAACTAACTA
CTCCCATCAAGTAGTAGCGACGTTTGTAACGCAAGAAAACTCAGTGAGGCATATTGCTGA
AGCTTTGGATATTTTAAAACACTGGTGCGAAAACTGGGAACCGAAGTTTATTTTTACAGA
TAATAACGAAGCAAGGACTGAAGCAATTGAACAAGTTTTTTCTGGTTGCAAAGTCTTAAT
AAGTGAATTACACAAAGAGAGAGCTTGGTTAAAACGAGGCTATTTATCTGATGCTAAAGT
TACTCCAGAAGCACAAGAACAAATTGTAGCTTTGTTAAAAGAAATTGCTCATTCTGAGGA
CGAGGCTTCATTTCAAAAATCACATGATGAACTAATGAACAGAGAAGATTCAAAAATGAA
TAGCAAACTTCAAAGTTATTTAAATTCCTGGTTCTCCATAAAAGAAAGATGGTGTTGGCT
GTATTGGCCCGAAGATATTCGTATTCTGATGCTTACCAACTATGGATTGGAACGCCATCA
TAATTTGTTTGAAGATATTCAAACTAAATTCAGACCAAGAAAAGTTCTACCGTTTTCGAT
TTCGTTTCTACACAAACATTTTCTCCCAGAACATTATAAGCAATACCGAATGGACAACAG
CTCATCTTTTAAACTTGAAACTTCAGACTTCATGCCTGCAGACATAGCACAACACCTTTG
TATAAAGGAACACTGCATAAGACAACTTTCTGAAGCAAATTCAAGGCAACCAGATTGCAT
TGAATGTGATTGCGATGAGTTTACGTTAAAATACGAAGATGGAACTGCTACAAAAGTTAT
TATTCCACCGTCGAACTTCCCACGGTGCTCTTGCGCCGTCTACCGCGCATCTTTTTTACC
ATGCTTTCACATTTTCACACTGTTTCCGATTTGCGAGAATTTTTCTTGGGCGTCTCTTCC
GTGTTGGTTTAGAGACTCTGTGTTTCTTTCTTTAGACCCGCACGTGTGTAATTTGCCTGC
TACCGTCCAAGTAATGATAGAACAGCCGTCAGAACTCGAAAACGAAACAGTCGAACACGT
ACTCGAACTGTCTTCGGTAACGGTTTCACCTTCCAGCCCAACTACTGACTTAAACACCGA
TATACGACGCCTTTTGGACCAAATCCAAGCTGTTTGTGAATCCGCACCAAACGAAGAGCT
AGCGACTACAAAAACTGATTTAGAAATTATTTTGTATCGCTTACAAAACGGAACAGATAA
TGCATGTACTTTAAATCGTGCAGATGTTCAAAAAAGAAAGACTTCTACGCAATACGAATT
TGAACCTGAAGCAAAGGTAAGATTGGCAGATTTCTCTTCAAACTAAATCGTGTAAAACTT
TTGCAATTACCTCTATTGATCATACCTCTACTGCAGCAATAAAGAAAGTACAATTTA

InterProScan

Pfam
CaRF (IPR029309) - T[71-251] 1.8E-25
ProSiteProfiles
Znf_SWIM (IPR007527) - T[609-644] 8.531

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value