Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C2.236.v2....'
  2. Transcript 'Cisavi.CG.ENS81.R254...'
  3. Transcript 'KH2012:KH.S562.6.v1....'

Transcript Model

Transcript Id

KH2012:KH.S562.6.v1.A.nonSL2-1

Possible name(s)

CARF

Location

KhS562 [27,428 / 36,050]

Sequences

Amino acid sequence

Length: 786

>KH.S562.6.v1.A.nonSL2-1
NTEEMETENGGTTATDTTHKEKIVHSMDEVNQTIKDFETSSQTKFLKHSGKIYDNTPQKS
KVFWRVDDTGDMVPYFTTGFTKYICIHSRDRHSYLSKKCTSEKDKLLRMQKSKKRDCGAT
ISVSHMVQFPELKKPTNVAIYQKTLATRFIKYRLTTDNNIKQEPTFRIVFPQNTDHSGHV
IGGQDIKGEMDERLVLKIDEYVSNGVSNVKHIMNNLEKFVTEDLFKDGSIPLLSNKRYFP
TAKAIKRQYHKSFLQKQLCEYDQDTLMRDIDHWKQEISPEDNILFRPFIPTPPIDKDDTL
SSLDHQFLFVHQLGWQRELLHRYGNDFCFLDFTVKQTRFALPLHFLCVKTNYSHQVVATF
VTQENSVRHIAEALDILKHWCENWEPKFIFTDNNEARTEAIEQVFSGCKVLISELHKERA
WLKRGYLSDAKVTPEAQEQIVALLKEIAHSEDEASFQKSHDELMNREDSKMNSKLQSYLN
SWFSIKERWCWLYWPEDIRILMLTNYGLERHHNLFEDIQTKFRPRKVLPFSISFLHKHFL
PEHYKQYRMDNSSSFKLETSDFMPADIAQHLCIKEHCIRQLSEANSRQPDCIECDCDEFT
LKYEDGTATKVIIPPSNFPRCSCAVYRASFLPCFHIFTLFPICENFSWASLPCWFRDSVF
LSLDPHVCNLPATVQVMIEQPSELENETVEHVLELSSVTVSPSSPTTDLNTDIRRLLDQI
QAVCESAPNEELATTKTDLEIILYRLQNGTDNACTLNRADVQKRKTSTQYEFEPEAKVRL
ADFSSN

Nucleotide sequence

Length: 2,506

>KH2012:KH.S562.6.v1.A.nonSL2-1
GTGTTGTGAAAGTTGCAATTAAAGAAAGAGTTTACGTATTTTGTTTTTATATTATTTATT
TGTGGAATATTTGAAATACAGAGGAAATGGAAACAGAAAATGGCGGTACAACAGCGACTG
ATACCACACACAAGGAAAAGATCGTACATTCTATGGATGAAGTAAATCAAACAATCAAAG
ATTTTGAAACTTCTTCACAAACCAAATTCCTAAAACATTCCGGCAAAATTTATGATAATA
CGCCACAGAAAAGCAAAGTTTTCTGGAGAGTGGACGATACTGGTGATATGGTGCCTTACT
TTACAACTGGGTTTACAAAGTACATTTGTATTCATAGTAGAGATAGACATTCGTATCTTA
GCAAGAAGTGCACTTCAGAAAAAGATAAATTGTTGCGAATGCAAAAGAGTAAAAAGAGAG
ATTGTGGAGCTACTATTAGTGTATCGCATATGGTGCAATTCCCAGAGCTAAAGAAGCCAA
CCAATGTTGCGATTTATCAGAAAACTTTGGCCACCAGGTTCATTAAATATAGATTAACTA
CGGATAATAATATTAAACAAGAACCAACCTTTCGAATTGTTTTTCCACAAAACACCGACC
ACTCTGGCCATGTAATAGGAGGGCAGGATATCAAAGGTGAAATGGACGAACGCTTGGTGT
TGAAAATCGATGAATACGTTAGTAATGGGGTTTCAAATGTGAAACATATTATGAACAATC
TGGAGAAGTTTGTCACAGAGGATTTGTTCAAAGATGGAAGTATACCACTGCTTTCAAATA
AACGATATTTCCCAACAGCTAAAGCTATTAAGAGACAATATCACAAATCCTTCCTCCAAA
AACAGTTATGTGAATATGACCAAGACACTCTCATGCGCGACATTGATCATTGGAAGCAAG
AAATATCTCCTGAAGATAATATTTTGTTCCGGCCGTTTATTCCTACCCCTCCTATTGATA
AAGATGACACTTTGTCCTCTCTTGATCATCAATTCCTCTTCGTTCATCAACTAGGCTGGC
AAAGGGAGCTTTTGCATCGTTACGGAAACGATTTTTGTTTCCTGGACTTCACAGTAAAAC
AGACACGATTCGCGCTACCCCTGCATTTTCTTTGTGTGAAAACTAACTACTCCCATCAAG
TAGTAGCGACGTTTGTAACGCAAGAAAACTCAGTGAGGCATATTGCTGAAGCTTTGGATA
TTTTAAAACACTGGTGCGAAAACTGGGAACCGAAGTTTATTTTTACAGATAATAACGAAG
CAAGGACTGAAGCAATTGAACAAGTTTTTTCTGGTTGCAAAGTCTTAATAAGTGAATTAC
ACAAAGAGAGAGCTTGGTTAAAACGAGGCTATTTATCTGATGCTAAAGTTACTCCAGAAG
CACAAGAACAAATTGTAGCTTTGTTAAAAGAAATTGCTCATTCTGAGGACGAGGCTTCAT
TTCAAAAATCACATGATGAACTAATGAACAGAGAAGATTCAAAAATGAATAGCAAACTTC
AAAGTTATTTAAATTCCTGGTTCTCCATAAAAGAAAGATGGTGTTGGCTGTATTGGCCCG
AAGATATTCGTATTCTGATGCTTACCAACTATGGATTGGAACGCCATCATAATTTGTTTG
AAGATATTCAAACTAAATTCAGACCAAGAAAAGTTCTACCGTTTTCGATTTCGTTTCTAC
ACAAACATTTTCTCCCAGAACATTATAAGCAATACCGAATGGACAACAGCTCATCTTTTA
AACTTGAAACTTCAGACTTCATGCCTGCAGACATAGCACAACACCTTTGTATAAAGGAAC
ACTGCATAAGACAACTTTCTGAAGCAAATTCAAGGCAACCAGATTGCATTGAATGTGATT
GCGATGAGTTTACGTTAAAATACGAAGATGGAACTGCTACAAAAGTTATTATTCCACCGT
CGAACTTCCCACGGTGCTCTTGCGCCGTCTACCGCGCATCTTTTTTACCATGCTTTCACA
TTTTCACACTGTTTCCGATTTGCGAGAATTTTTCTTGGGCGTCTCTTCCGTGTTGGTTTA
GAGACTCTGTGTTTCTTTCTTTAGACCCGCACGTGTGTAATTTGCCTGCTACCGTCCAAG
TAATGATAGAACAGCCGTCAGAACTCGAAAACGAAACAGTCGAACACGTACTCGAACTGT
CTTCGGTAACGGTTTCACCTTCCAGCCCAACTACTGACTTAAACACCGATATACGACGCC
TTTTGGACCAAATCCAAGCTGTTTGTGAATCCGCACCAAACGAAGAGCTAGCGACTACAA
AAACTGATTTAGAAATTATTTTGTATCGCTTACAAAACGGAACAGATAATGCATGTACTT
TAAATCGTGCAGATGTTCAAAAAAGAAAGACTTCTACGCAATACGAATTTGAACCTGAAG
CAAAGGTAAGATTGGCAGATTTCTCTTCAAACTAAATCGTGTAAAACTTTTGCAATTACC
TCTATTGATCATACCTCTACTGCAGCAATAAAGAAAGTACAATTTA

InterProScan

Pfam
CaRF (IPR029309) - T[71-251] 1.8E-25
ProSiteProfiles
Znf_SWIM (IPR007527) - T[609-644] 8.531

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value