Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S588.2.v1.R.ND1-1

Possible name(s)

KH.S588.2

Gene model

KH2012:KH.S588.2

Location

KhS588 [13,560 / 15,264]

Sequences

Amino acid sequence

Length: 366

>KH.S588.2.v1.R.ND1-1
FANMSYQNKTYIESEGTYHYVTAAGANYSKAKSICKNNFQSKLAVLNTQQLFDKAKSLID
TGTFFIGLHKPNNSVPYQWLDGSAFNRSLINGPNITNGNAPGCRGVVIKVPGQSNPVNLI
AYDCASGQNVLCFTPAPITTTQEATTKWKAITTTKEATTTTTQKVTATTKQEATTATEGA
TTNQAFLSTTSYDTTTTTLSPTTNAVLTKVQPTTQLYNSTQMTTTGLTNTQSANAGGLQL
GIVVGIPLGVVFLLILLIALIVWLKRRGGDKSNEADAENDNDEREVRLNVIYDTGDNYGA
AGTTHGDHGTTHGDHGTTHGDHGTSELYSKIDKRSPTQETAYDVIEGNNTARIMEPDGVY
SGLNNT

Nucleotide sequence

Length: 1,375

>KH2012:KH.S588.2.v1.R.ND1-1
ATCGCCAAAAATATATAGTTTGCTAATATGTCTTATCAAAACAAGACCTACATTGAAAGT
GAGGGGACATATCACTACGTCACAGCAGCAGGCGCCAACTACTCTAAAGCAAAATCGATA
TGTAAGAATAACTTTCAATCCAAACTTGCTGTGCTTAATACTCAACAACTGTTTGATAAA
GCGAAGTCTTTAATTGACACTGGAACATTTTTCATTGGGTTGCATAAACCGAATAACAGT
GTACCATATCAGTGGCTGGATGGAAGCGCTTTCAATCGATCTTTGATAAACGGGCCAAAT
ATAACGAACGGAAACGCCCCTGGCTGTCGAGGAGTGGTGATAAAGGTTCCAGGTCAAAGT
AATCCCGTGAATTTAATTGCATACGATTGTGCTTCCGGTCAGAATGTTCTCTGTTTCACT
CCCGCCCCAATAACAACAACACAAGAAGCCACAACTAAATGGAAGGCAATAACGACAACA
AAAGAAGCAACAACGACAACAACACAAAAAGTAACCGCAACAACCAAACAAGAAGCAACG
ACAGCAACAGAAGGAGCAACAACGAATCAAGCATTCCTTTCTACAACCAGCTACGACACA
ACGACAACTACACTGTCCCCTACAACCAACGCAGTGCTTACCAAGGTACAACCGACCACT
CAACTCTACAATTCAACGCAGATGACAACCACGGGGTTAACAAACACACAAAGCGCCAAC
GCTGGCGGTCTGCAACTTGGTATCGTTGTGGGGATTCCTCTAGGTGTGGTGTTCCTTCTA
ATTTTGCTTATAGCTCTCATAGTTTGGTTGAAACGTCGCGGTGGCGATAAAAGCAACGAA
GCGGACGCGGAAAACGATAATGATGAACGCGAAGTTCGTTTAAACGTCATATACGATACC
GGGGACAACTACGGCGCCGCTGGGACCACTCATGGCGACCACGGGACCACTCATGGCGAC
CACGGGACCACTCATGGCGACCACGGGACCAGCGAATTATATTCAAAGATAGACAAGCGG
AGTCCAACACAAGAAACGGCTTATGATGTCATAGAGGGCAACAATACAGCGCGAATAATG
GAACCAGATGGAGTTTATTCCGGACTAAACAACACGTAGAAACAACGAATTTGAAGATAC
CATCTATTACTTATAAACATATTTCATTGCTCTTTTACCAACTATACACTCTGTAACTTC
GGCCTCAAATTTCCCAAATAAGTTTGAAACAAGAGGGTTACGAGTTGAAATCCACTATCA
TGCGTTAACATTTTTGTACTTTGACAGTTCACCCTTATTAATCGGTTGTAAACAATATCA
CTTATTTATTTAAACACATCAGGTATTACGTTGATAATTTGTTGCATGACAAACC

InterProScan

Gene3D	C-type_lectin-like/link_sf (IPR016186) - T[4-148] 1.2E-9
SUPERFAMILY	CTDL_fold (IPR016187) - T[16-145] 5.77E-12
Pfam	C-type_lectin-like (IPR001304) - T[26-132] 2.3E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value