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- Transcript 'KH2012:KH.S589.4.v1....'
Transcript Model
Transcript Id
KH2012:KH.S589.4.v1.R.ND1-1
Possible name(s)
TBX15; TBX18; TBX22
Gene model
Location
KhS589 [14,023 / 20,896]
Amino acid sequence
Length: 401
>KH.S589.4.v1.R.ND1-1
ATHKSDQISIDLVNKELWRKFHEIGTEMIITKAGRRMFPSIKLNFKGLDPTSMYILAIDI
LPVDNNRYRYVYHSSQWMAAGTTEASTPPRTYVHPDSPASGDVWMKQPITFDKLKLTNNE
QNNKGHLILHSMHKYQPRIHLISCGKFPKYDVISYVPAVGRIDDVIRDDVMTFVFPECAF
TTVTAYQNQQITQLKIDRNPFAKGFRDSNKSWKPRSSSNNERQTATKRQWRVKTTSQSPV
MTSNTTDHIVSPIHPMINTSSHPPIKRNKLHLEQAFNEPDFVFPSISPDYCVTNLDNDVT
CSELPYQRNPDDVIKPSDSGYDACLTSQSFLRPFDVNAFNPLQGDLPQTENAASFIDDFE
LELSTNGTNSDVKHNESEYYVISTSHSENDVTANLTSNNLE
Nucleotide sequence
Length: 2,248
>KH2012:KH.S589.4.v1.R.ND1-1
ATGAATCGTTATTCCAGCAATCACCATAGCTGCGGTATTACTTGTTACGTCATGTTTTCG
TCATTGGAGCACGTTGAGTCAGCCTCCTTCGATCCTTGCACTTCGGGTTCTTCCGGAAAT
CTTCGGAGAATTTCGGATTCCCCGCTTCATCTTCAGGATGCTGCAGAACTATCCGACTTA
GGGAATTTTCGGAGCGTTTCGGATTCGATCTCCGAAACTTCTCGTTCGTCGGAAAACTTT
GATGAGTCACTACAAAACCACCCGACTCACGATGACGAAATATCTTTTCTACCGTGGGAA
AATATAAACCCGGAAGTATTTCGAAACGACCAAATCGAAATAAGCGAGCCTGATCCTAAT
AATGCTGTTTATGACGCAACAAACTTTGACAATGGCCACTGTTCCACTCAATTCGACACC
CTTATACGTCACAACAGCGATTGTTACGTGTCAACGCGTGAATTATCACCAAACAATGAA
TTCAACAATGAGGTTTTGGGATGTGATAATGACGTCATAAACGATGGACGCTTCGATGAT
TGGAAATCTGGAATTCAAGTGAACGAATGGAACGAACCGCGAGATGACTCAAACATTGCT
TCTGCCCCACTTCCGCTCGCCCAAGATCCTCACCCACCAATCATAGACCTTACTCACTCC
CCACGTAACCACAGCACTGACCGCACGGAGGCGCCACAGAGCAGCATTCCCAGCAGCTAC
CACCTTTTATCATTGATGAATGGATTTTCATGCAGCCAACCCCCAAACTACCCACCTATC
CCAACAAACCACCAACCACACTTTCTACCGTTCAATCAACCAATCAACCACCCCGGTATT
AACCAAAACACTGCGCCACAACAAGACCTAGAAAACTTTTACATCCACAACCAACCTAAC
CAACACCATACGAGTCATAACAACCATTATATTCAAGATAACGAAACAAAATGGCCGCCA
AATATAGGCAACACACAAATCGGATCAAATCTCAATCGATCTCGTAAATAAAGAACTTTG
GCGAAAATTCCACGAAATTGGGACCGAGATGATCATTACCAAGGCTGGCAGACGAATGTT
CCCATCCATCAAACTGAACTTTAAAGGGTTGGACCCAACGTCTATGTACATCCTAGCTAT
TGATATATTGCCAGTAGATAACAACAGATACAGGTACGTCTACCATAGCTCCCAATGGAT
GGCAGCAGGCACCACAGAAGCAAGCACCCCACCTCGAACTTACGTGCATCCTGATTCGCC
AGCGTCTGGTGACGTATGGATGAAACAGCCAATCACATTCGACAAATTAAAACTGACCAA
TAACGAACAGAACAACAAGGGTCACTTGATCCTGCACTCGATGCATAAATACCAACCTCG
TATTCATCTCATATCGTGCGGCAAATTCCCCAAGTATGACGTCATCAGTTACGTACCCGC
CGTCGGGAGGATCGATGACGTCATTCGTGATGACGTCATGACGTTTGTGTTTCCCGAATG
CGCCTTCACGACCGTGACAGCTTACCAGAACCAACAGATCACACAACTTAAAATTGACAG
GAACCCTTTCGCTAAAGGTTTCAGAGACAGCAACAAATCTTGGAAACCTCGAAGCAGCAG
CAATAATGAAAGACAAACGGCCACAAAACGGCAGTGGAGAGTTAAAACTACGTCACAATC
ACCTGTGATGACGTCAAACACAACTGATCATATAGTTTCCCCAATCCACCCGATGATCAA
CACGTCATCCCACCCTCCTATAAAGAGGAACAAACTTCATTTAGAGCAAGCATTCAACGA
ACCGGACTTTGTCTTTCCTTCCATCTCGCCCGATTATTGCGTCACAAATCTTGACAATGA
CGTCACATGCAGTGAACTCCCTTACCAGAGAAATCCCGATGACGTCATTAAACCTTCGGA
TTCCGGCTATGACGCATGTCTGACGTCACAATCGTTTTTGAGGCCGTTCGATGTAAACGC
TTTTAACCCGTTACAGGGGGATTTACCCCAAACTGAGAATGCAGCTTCGTTTATTGACGA
TTTTGAGTTGGAACTCAGTACTAACGGAACAAATAGTGACGTCAAGCATAACGAAAGCGA
GTATTACGTCATTTCAACGTCACATTCCGAAAATGACGTCACGGCAAACCTGACGTCAAA
TAATTTAGAATAACCGAAGTTTCTATTTTCCGCTTTGTTTCCATGCACATTTTTATTTTA
AATATGAGAATACAAACTGTCTCAACAA
| Gene3D |
T-box_sf (IPR036960) - T[1-207] 1.7E-87 |
| PANTHER |
TF_T-box (IPR001699) - T[5-246] 7.3E-106 |
| SMART |
TF_T-box (IPR001699) - T[7-212] 1.0E-105 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[7-207] 3.73E-72 |
| CDD |
TF_T-box (IPR001699) - T[7-211] 7.07338E-118 |
| Pfam |
TF_T-box (IPR001699) - T[11-207] 4.2E-76 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[12-207] 73.498 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[17-36] . - T[93-111] . |
| PRINTS |
TF_T-box (IPR001699) - T[25-49] 8.7E-30 - T[92-105] 8.7E-30 - T[109-118] 8.7E-30 - T[128-142] 8.7E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX18_HUMAN | 63.054 % | 282 | 1.45E-89 |
| TBX15_HUMAN | 60.488 % | 274 | 1.57E-86 |
| TBX22_HUMAN | 60.294 % | 263 | 3.6E-83 |