- Transcript 'KH2012:KH.S615.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.S615.3.v1.A.ND1-1
Possible name(s)
FGF4; FGF5; FGF6
Gene model
Location
KhS615 [15,976 / 19,952]
Amino acid sequence
Length: 232
>KH.S615.3.v1.A.ND1-1
VVEMPLRSVLIKVVIIAIVICVLIHCSDARRRRQRRTGSHRGFESRRRSDRSRSVKVHED
PHKETIRAIQVTGSIFSRLLHPHNNHQPNIKLVRRERLYCRVGIGYQLEVRKDGKVTARH
QSTKNGIFEVFSMKHGVVGIRSERHRRYVCMNKRGRVFTRRSFRHDCEFREELEANGYVT
FASQLYSDHQRRLGYFLAVSKRGKPRRGKRVTWKMQSAHWLARTVTDKKSNT
Nucleotide sequence
Length: 1,036
>KH2012:KH.S615.3.v1.A.ND1-1
GAGGAATAACTTTATATTGTGGGCAGACATAAGTTGTAGAAATGCCGTTAAGAAGCGTTT
TAATTAAAGTCGTCATAATAGCTATTGTGATCTGTGTTCTAATTCATTGTTCTGATGCAA
GAAGACGAAGACAGCGAAGAACCGGAAGCCATCGCGGGTTCGAATCCCGGCGTCGGAGTG
ATCGGTCAAGGTCAGTTAAAGTGCACGAGGATCCGCACAAGGAAACCATCCGCGCCATCC
AAGTGACAGGCAGTATATTCTCGCGACTTCTCCACCCGCACAACAACCACCAACCTAATA
TTAAACTTGTGCGTCGTGAACGTTTGTACTGCAGGGTTGGGATCGGGTACCAGCTGGAAG
TTCGTAAAGATGGCAAGGTTACCGCGCGACATCAAAGTACTAAGAATGGTATATTTGAAG
TCTTCAGCATGAAGCATGGGGTCGTGGGGATAAGAAGCGAACGACATCGAAGATATGTTT
GTATGAATAAAAGAGGGAGAGTGTTTACTAGGCGATCCTTCCGCCATGATTGTGAGTTCA
GGGAGGAATTGGAAGCTAATGGTTACGTCACGTTTGCGTCACAATTATACAGCGACCACC
AGCGGAGGTTAGGTTACTTTCTTGCGGTGTCGAAGAGGGGGAAACCCCGGAGAGGGAAAC
GGGTCACGTGGAAAATGCAGAGCGCTCATTGGTTAGCAAGAACTGTGACAGACAAGAAAT
CAAACACGTGATAACCAGCGTGACAAACTAATCGTGACGTCACGATGACGTAATCATGAC
GTGGACGCAACCCACGAGTCGCCGCTGGAGGCGCCAGCACCAAAATACTCCACACTGCCA
CCTAGCGAGAGGGGACGGCTGCTAACCGGAAATGATGTAAATAAACAATCTCACTGTGCC
CATAGTTACGTCATAATGTGTTTATTGTAACAATGTAAATATTCATTATTTCGTAACAAT
AACTGTTTGTTTCTATTTATGACGTCACAATCAAAGTTCCATTTGCACATTTCCTTCTTG
AATAAAAACGGAAACC
| PANTHER |
Fibroblast_GF_fam (IPR002209) - T[3-232] 9.5E-92 |
| SUPERFAMILY |
IL1/FGF (IPR008996) - T[87-228] 8.05E-39 |
| SMART |
Fibroblast_GF_fam (IPR002209) - T[92-224] 2.8E-33 |
| Pfam |
Fibroblast_GF_fam (IPR002209) - T[94-221] 4.1E-36 |
| PRINTS |
Fibroblast_GF_fam (IPR002209) - T[96-108] 4.0E-13 - T[128-142] 4.0E-13 - T[148-160] 4.0E-13 - T[164-183] 4.0E-13 |
| CDD |
Fibroblast_GF_fam (IPR002209) - T[97-223] 1.28049E-30 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGF6_HUMAN | 35.821 % | 101 | 1.94E-26 |
| FGF4_HUMAN | 34.328 % | 93.6 | 1.5E-23 |
| FGF5_HUMAN | 37.121 % | 102 | 2.15E-26 |