- Transcript 'KH2012:KH.S654.2.v2....' >
- Transcript 'KH2012:KH.C11.673.v1...' >
- Transcript 'KH2012:KH.S654.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.S654.2.v2.A.nonSL3-1
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
KhS654 [30,754 / 31,970]
Amino acid sequence
Length: 296
>KH.S654.2.v2.A.nonSL3-1
FYLHPNSPCSGHQWMKEIISFHKVKLTNSCGNSADGKFLIHSMHRYQPRIHIVRTDDVNT
LHLQPMSTFAFPQTAFVTVTAYQNGQITKLKIANNPFARGFREDGAKTKKRKSQVSTFTD
QQVLTKNNQRYSPEATTSNLEKRMKFENVLSGEHVHLQPTAWYQSTNHFLPADCKQSYST
SQQTVHPQNHNGSPPPPYAFQYSDVSPCNNRYDFSVANNPIHPQNIQYYDQQPPFDPVFP
SHNNYVYHHKVMSNPINSSEVNSISYFTSPQNSPDDVHLENTQFCYNNFQYIDSFA
Nucleotide sequence
Length: 988
>KH2012:KH.S654.2.v2.A.nonSL3-1
ATTTTATTTACACCCCAACTCACCTTGCAGCGGGCATCAATGGATGAAAGAAATCATTTC
GTTTCATAAAGTGAAACTCACAAACTCTTGTGGAAACTCAGCTGATGGAAAGTTCCTCAT
ACACTCCATGCATCGGTATCAACCTCGTATCCACATCGTTCGTACTGATGACGTCAATAC
TCTGCATCTACAACCGATGTCAACTTTCGCTTTTCCACAAACTGCTTTCGTCACAGTCAC
GGCCTACCAAAACGGACAGATCACTAAACTGAAAATTGCAAACAATCCGTTTGCACGAGG
TTTCCGTGAAGACGGTGCTAAAACAAAGAAGAGAAAATCACAAGTTTCAACATTTACGGA
TCAACAAGTCCTTACTAAAAATAATCAGAGATATTCCCCCGAAGCAACAACATCGAATTT
GGAAAAAAGAATGAAGTTCGAAAATGTATTGAGTGGTGAACATGTTCACCTACAACCAAC
GGCATGGTACCAGAGCACAAATCACTTCCTACCCGCTGATTGTAAACAAAGTTATTCTAC
TTCACAACAAACTGTACATCCTCAGAATCATAATGGGTCACCACCACCACCATATGCATT
CCAATATTCTGACGTCAGTCCTTGCAATAATCGCTACGACTTCTCGGTCGCAAACAATCC
AATTCATCCACAGAATATTCAGTATTACGACCAACAACCACCATTTGATCCGGTATTTCC
CTCCCATAACAATTATGTTTACCACCACAAAGTGATGTCCAATCCCATTAATTCATCTGA
AGTTAATTCAATAAGTTATTTCACTTCGCCACAAAATTCACCTGATGATGTCCATCTGGA
AAACACCCAATTTTGTTATAACAATTTTCAATACATTGACAGTTTTGCTTAAATACAAAT
TTGAAAGTTCCTTTTAATACTTTTTTGTTATTGTTCGAAAAATGCGTTTTTGTCACTGTT
AGTAATTGTGTCCTATAGTTGAATAAAA
| SMART |
TF_T-box (IPR001699) - T[1-108] 8.1E-11 |
| PANTHER |
TF_T-box (IPR001699) - T[1-137] 8.3E-61 - T[136-259] 8.3E-61 |
| Gene3D |
T-box_sf (IPR036960) - T[1-110] 2.9E-43 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-103] 41.678 |
| Pfam |
TF_T-box (IPR001699) - T[2-103] 4.0E-39 |
| PRINTS |
TF_T-box (IPR001699) - T[2-15] 1.7E-25 - T[19-28] 1.7E-25 - T[39-53] 1.7E-25 - T[74-87] 1.7E-25 - T[95-103] 1.7E-25 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[2-105] 4.6E-36 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[3-21] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 54.054 % | 135 | 6.57E-37 |
| TBX2_HUMAN | 48.276 % | 127 | 5.18E-33 |
| TBX18_HUMAN | 46.875 % | 124 | 5.01E-32 |