- Transcript 'KH2012:KH.S654.2.v2....' >
- Transcript 'KH2012:KH.C11.673.v1...' >
- Transcript 'KH2012:KH.S654.2.v2....' >
- Transcript 'KH2012:KH.S654.2.v2....'
Transcript Model
Transcript Id
KH2012:KH.S654.2.v2.A.nonSL4-1
Possible name(s)
TBX2; TBX3; TBX6
Gene model
Location
KhS654 [30,754 / 31,919]
Amino acid sequence
Length: 279
>KH.S654.2.v2.A.nonSL4-1
IISFHKVKLTNSCGNSADGKFLIHSMHRYQPRIHIVRTDDVNTLHLQPMSTFAFPQTAFV
TVTAYQNGQITKLKIANNPFARGFREDGAKTKKRKSQVSTFTDQQVLTKNNQRYSPEATT
SNLEKRMKFENVLSGEHVHLQPTAWYQSTNHFLPADCKQSYSTSQQTVHPQNHNGSPPPP
YAFQYSDVSPCNNRYDFSVANNPIHPQNIQYYDQQPPFDPVFPSHNNYVYHHKVMSNPIN
SSEVNSISYFTSPQNSPDDVHLENTQFCYNNFQYIDSFA
Nucleotide sequence
Length: 937
>KH2012:KH.S654.2.v2.A.nonSL4-1
AATCATTTCGTTTCATAAAGTGAAACTCACAAACTCTTGTGGAAACTCAGCTGATGGAAA
GTTCCTCATACACTCCATGCATCGGTATCAACCTCGTATCCACATCGTTCGTACTGATGA
CGTCAATACTCTGCATCTACAACCGATGTCAACTTTCGCTTTTCCACAAACTGCTTTCGT
CACAGTCACGGCCTACCAAAACGGACAGATCACTAAACTGAAAATTGCAAACAATCCGTT
TGCACGAGGTTTCCGTGAAGACGGTGCTAAAACAAAGAAGAGAAAATCACAAGTTTCAAC
ATTTACGGATCAACAAGTCCTTACTAAAAATAATCAGAGATATTCCCCCGAAGCAACAAC
ATCGAATTTGGAAAAAAGAATGAAGTTCGAAAATGTATTGAGTGGTGAACATGTTCACCT
ACAACCAACGGCATGGTACCAGAGCACAAATCACTTCCTACCCGCTGATTGTAAACAAAG
TTATTCTACTTCACAACAAACTGTACATCCTCAGAATCATAATGGGTCACCACCACCACC
ATATGCATTCCAATATTCTGACGTCAGTCCTTGCAATAATCGCTACGACTTCTCGGTCGC
AAACAATCCAATTCATCCACAGAATATTCAGTATTACGACCAACAACCACCATTTGATCC
GGTATTTCCCTCCCATAACAATTATGTTTACCACCACAAAGTGATGTCCAATCCCATTAA
TTCATCTGAAGTTAATTCAATAAGTTATTTCACTTCGCCACAAAATTCACCTGATGATGT
CCATCTGGAAAACACCCAATTTTGTTATAACAATTTTCAATACATTGACAGTTTTGCTTA
AATACAAATTTGAAAGTTCCTTTTAATACTTTTTTGTTATTGTTCGAAAAATGCGTTTTT
GTCACTGTTAGTAATTGTGTCCTATAGTTGAATAAAA
| Gene3D |
T-box_sf (IPR036960) - T[1-94] 6.6E-34 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-86] 33.901 |
| PANTHER |
TF_T-box (IPR001699) - T[1-121] 4.1E-46 - T[116-242] 4.1E-46 |
| SMART |
TF_T-box (IPR001699) - T[1-91] 2.4E-6 |
| PRINTS |
TF_T-box (IPR001699) - T[2-11] 1.6E-19 - T[22-36] 1.6E-19 - T[57-70] 1.6E-19 - T[78-86] 1.6E-19 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[2-86] 7.21E-28 |
| Pfam |
TF_T-box (IPR001699) - T[2-86] 1.7E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX6_HUMAN | 55.319 % | 114 | 3.78E-29 |
| TBX2_HUMAN | 47.959 % | 102 | 1.66E-24 |
| TBX18_HUMAN | 45.946 % | 99 | 2.36E-23 |